Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq122 632 5e-179
>seq122
Length=4874392
Score = 632 bits (700), Expect = 5e-179
Identities = 390/414 (94%), Gaps = 2/414 (0%)
Strand=Plus/Minus
Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4450953 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 4450894
Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4450893 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 4450834
Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 4450833 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCC 4450774
Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240
|| |||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||
Sbjct 4450773 ACCTACTAGCTAATCCCATCTGGGCACATCCGATGGTGTGAGGCCCGAAGGTCCCCCACT 4450714
Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 4450713 TTGGTCCGAAGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCG 4450654
Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||
Sbjct 4450653 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCACCCAAG-AGCAAGCT-CTC 4450596
Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4450595 TGTGCTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 4450542
Score = 632 bits (700), Expect = 5e-179
Identities = 390/414 (94%), Gaps = 2/414 (0%)
Strand=Plus/Minus
Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4582567 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 4582508
Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4582507 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 4582448
Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 4582447 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCC 4582388
Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240
|| |||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||
Sbjct 4582387 ACCTACTAGCTAATCCCATCTGGGCACATCCGATGGTGTGAGGCCCGAAGGTCCCCCACT 4582328
Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 4582327 TTGGTCCGAAGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCG 4582268
Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||
Sbjct 4582267 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCACCCAAG-AGCAAGCT-CTC 4582210
Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4582209 TGTGCTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 4582156
Score = 632 bits (700), Expect = 5e-179
Identities = 390/414 (94%), Gaps = 2/414 (0%)
Strand=Plus/Minus
Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4738071 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 4738012
Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4738011 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 4737952
Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 4737951 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACCCC 4737892
Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240
|| |||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||
Sbjct 4737891 ACCTACTAGCTAATCCCATCTGGGCACATCCGATGGTGTGAGGCCCGAAGGTCCCCCACT 4737832
Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct 4737831 TTGGTCCGAAGACGTTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCCATCG 4737772
Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360
||||||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||
Sbjct 4737771 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCACCCAAG-AGCAAGCT-CTC 4737714
Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737713 TGTGCTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 4737660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1222323441088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |