Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq122 136 7e-30
>seq122
Length=4874392
Score = 136 bits (150), Expect = 7e-30
Identities = 187/255 (73%), Gaps = 15/255 (6%)
Strand=Plus/Plus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| ||||||||||| ||| | | |||||||||||| ||| || ||||||||||
Sbjct 4584059 ACACGGTGGATGCCTAGGCAGTCAGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGT 4584118
Query 66 CGGGGAG-TGAGC--AAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCC 122
||| || ||| || | || | | ||| ||| |||||||||||||||| |
Sbjct 4584119 CGGTAAGGTGATATGAACCGCAAT---AACCGACGATACCCGAATGGGGAAACCCAGTGT 4584175
Query 123 TTTGGGTCA---TTGCATGC--TGAATACATA--GGTATGCAAAGCGAACGCGGCGAACT 175
| |||| | |||| |||||||||| || ||| | |||||| || |||||
Sbjct 4584176 GATACGTCACACTATCATGTCATGAATACATAGTGGCATG--AGGCGAACCGGGGGAACT 4584233
Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235
|||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||
Sbjct 4584234 GAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGC 4584293
Query 236 GAAATGGGATGAGCC 250
||| |||| ||||
Sbjct 4584294 GAACGGGGAACAGCC 4584308
Score = 131 bits (144), Expect = 3e-28
Identities = 186/255 (73%), Gaps = 15/255 (6%)
Strand=Plus/Plus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| ||||||||||| ||| | | |||||||||||| ||| || ||||||||||
Sbjct 4452445 ACACGGTGGATGCCTAGGCAGTCAGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGT 4452504
Query 66 CGGGGAG-TGAGC--AAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCC 122
||| || ||| || | || | ||| ||| |||||||||||||||| |
Sbjct 4452505 CGGTAAGGTGATATGAACCGCAAC---AACCGACGATACCCGAATGGGGAAACCCAGTGT 4452561
Query 123 TTTGGGTCA---TTGCATGC--TGAATACATA--GGTATGCAAAGCGAACGCGGCGAACT 175
| |||| | |||| |||||||||| || ||| | |||||| || |||||
Sbjct 4452562 GATACGTCACACTATCATGTCATGAATACATAGTGGCATG--AGGCGAACCGGGGGAACT 4452619
Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235
|||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||
Sbjct 4452620 GAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGC 4452679
Query 236 GAAATGGGATGAGCC 250
||| |||| ||||
Sbjct 4452680 GAACGGGGAACAGCC 4452694
Score = 131 bits (144), Expect = 3e-28
Identities = 186/255 (73%), Gaps = 15/255 (6%)
Strand=Plus/Plus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| ||||||||||| ||| | | |||||||||||| ||| || ||||||||||
Sbjct 4739563 ACACGGTGGATGCCTAGGCAGTCAGAGGCGATGAAGGGCGTGCTAATCTGCGATAAGCGT 4739622
Query 66 CGGGGAG-TGAGC--AAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCC 122
||| || ||| || | || | ||| ||| |||||||||||||||| |
Sbjct 4739623 CGGTAAGGTGATATGAACCGCAAC---AACCGACGATACCCGAATGGGGAAACCCAGTGT 4739679
Query 123 TTTGGGTCA---TTGCATGC--TGAATACATA--GGTATGCAAAGCGAACGCGGCGAACT 175
| |||| | |||| |||||||||| || ||| | |||||| || |||||
Sbjct 4739680 GATACGTCACACTATCATGTCATGAATACATAGTGGCATG--AGGCGAACCGGGGGAACT 4739737
Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235
|||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||
Sbjct 4739738 GAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGC 4739797
Query 236 GAAATGGGATGAGCC 250
||| |||| ||||
Sbjct 4739798 GAACGGGGAACAGCC 4739812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918342480608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |