Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014-
06-04] 6,263 sequences; 415,781,860 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq871 188 1e-45
seq385 118 2e-24
>seq871
Length=10861
Score = 188 bits (208), Expect = 1e-45
Identities = 123/133 (92%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 5986 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 6043
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 6044 GCCGCGACGCTACCATCTGCCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCG 6103
Query 121 GAACGGGGTGATT 133
||||| || ||||
Sbjct 6104 GAACGCGGCGATT 6116
>seq385
Length=166179
Score = 118 bits (130), Expect = 2e-24
Identities = 83/95 (87%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88
||||||| ||||| ||||| || | ||||||| |||||||||||||||||||||| ||
Sbjct 159062 AATTGGTATTTGCCCCTGTCCGAACGGGCAGTGGGGCGAAGCTACCATCTGCTGGATAAT 159121
Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123
||||||||||||||||| |||||||| ||| ||||
Sbjct 159122 GGCTGAACGCCTCTAAGCCAGAATCCGTGCTAGAA 159156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819150296832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |