Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq93 116 3e-21 >seq93 Length=974399 Score = 116 bits (128), Expect = 3e-21 Identities = 181/254 (71%), Gaps = 11/254 (4%) Strand=Plus/Minus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 || || |||||||| || || | || |||||| ||| || ||||||||| | || Sbjct 914849 TTATTTAATGCCATTGAAACACTCCCATGTGTGAAGAAGAAGGCCGATTGGGCCATGAAG 914790 Query 61456 TGGAT----CACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 ||||| || ||| | || || |||| ||| ||| | | || ||||| | || Sbjct 914789 TGGATTGCTCATGAGT----CTGCCACGTTTGCTGAGCGAGTAATTGCCTTTGCTGCTGT 914734 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 |||||| | || ||| |||| ||||| || || || ||| | ||||| | || || Sbjct 914733 GGAGGGTATCTTCTTCTCTGGAAGCTTTGCTGCCATTTTCTGGCTTAAGAAGAGAGGGCT 914674 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGC-ATTGTG 61630 |||||| ||||| |||||||||||||||||||| ||||| || || |||| || ||| | Sbjct 914673 TATGCCAGGTCTTACCTTCAGCAATGAGTTGATTTCACGAGATGA-GGCAAGCTATTTTC 914615 Query 61631 ATTTTGCTGTTTTG 61644 || || ||||||| Sbjct 914614 TTTCTG-TGTTTTG 914602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397537653510320