Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Frankliniella_20occidentalis_20[genbank_20GCA_5F000697945.1_202014- 06-04] 6,263 sequences; 415,781,860 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq122 196 1e-45 >seq122 Length=4874392 Score = 196 bits (216), Expect = 1e-45 Identities = 221/296 (75%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 33619 ACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAAC 33678 |||| ||| |||||||| || ||||| ||||| | ||||||||||| | || ||| Sbjct 4802327 ACAACTTCGGTGGTGTACTTCTCAACGCCAGCCTGGTCAGTCCATTTACGGGTCTGCAGT 4802268 Query 33679 TGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGC 33738 ||||| | |||||| || |||||||| | || || ||||| || | |||||| ||| Sbjct 4802267 GCGCCTTCGATATAAACCTGAGAGCCTTTACGCAGGTATTCACCGGCCACTTCAGCCAGC 4802208 Query 33739 TTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTA 33798 ||||| || | || ||||||||||||||||||| ||| || | || || || ||| Sbjct 4802207 TTGCCGAACAGCACAACGCGGTGCCATTCAGTTTTCTCTTTGGTTTCGCCGGTCTGCTTG 4802148 Query 33799 TCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATG 33858 || ||| ||||| || ||||| | || | ||||||||| || |||||||| |||||| Sbjct 4802147 TCGCGCCAGGATTCGGAGGTAGCCAGAGTGATGTTGGCAACGGCACCGCCATTCGGCATG 4802088 Query 33859 TATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCC 33914 || || ||||| |||||||| || | | |||| | |||||||| |||||||| Sbjct 4802087 TAGCGAACTTCCGGGTCCTGCCCCAGATTTCCGACTAAAATTACTTTGTTTACGCC 4802032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144962017919824