Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1688 192 1e-46 >seq1688 Length=4358 Score = 192 bits (212), Expect = 1e-46 Identities = 247/332 (74%), Gaps = 8/332 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| ||||| |||| || |||||||||| ||||||||| Sbjct 2713 CCCGATGAGGGGAGTGAAAGAGACC-TGAAACCAAATGCCTACAAGCAGTCGGAGCCTCT 2655 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | || ||||||||||| ||||||| |||||| | | |||||| | || ||||||| Sbjct 2654 T-ATGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGAGTTTCT-GTTTGCAGCGAG 2597 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTT 182 |||| || ||| || ||| |||| ||||||||| || || ||||||| ||||| Sbjct 2596 CCTAAGCCGTT-AGGT--GTAAGC-GAAGCGAAAGCGAGTCTGAATAGGGCGAATGAGTT 2541 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 | |||| |||| ||||||| |||||||| ||| | |||| ||||| |||||||| Sbjct 2540 GCTGGCAGAAGACCCGAAACCGAGTGATCTAGCCATGGCCAGGCTGAAGGTGCGGTAACA 2481 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 || |||||| ||||||| |||||||| | |||||| | || |||||| Sbjct 2480 CGCACTGGAGGGCCGAACCCACGCCTGTTGAAAAAGTCGGGGATGAGCTGTGGCTAGGGG 2421 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||| ||| |||||| || Sbjct 2420 TGAAAGGCCAATCAAACTCGGAGATAGCTGGT 2389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972778491392