Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1187 114 5e-23 seq2159 109 2e-21 seq2146 109 2e-21 seq1808 109 2e-21 seq1713 109 2e-21 seq1098 109 2e-21 seq1817 104 1e-19 >seq1187 Length=8028 Score = 114 bits (126), Expect = 5e-23 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||||| |||||||| | | |||||||||||||||||||||| Sbjct 3093 TTGAGACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 3152 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | | || ||||| ||||||||||||| || || ||||||||||||||| Sbjct 3153 GGATGTCTGAAGTTATTCTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGGCGA 3210 >seq2159 Length=947710 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||||| |||||||| | | |||||||||||||||||||||| Sbjct 944378 TTGAGACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 944319 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| | | || ||||| ||||||||||||| || || |||||||||||| Sbjct 944318 GGATGTCTGAAGTTATTCTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGG 944264 >seq2146 Length=283931 Score = 109 bits (120), Expect = 2e-21 Identities = 95/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||||| |||||||| | | |||||||||||||||||||||| Sbjct 3372 TTGAGACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 3431 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | | || || || ||||||||||||| || || ||||||||||||||| Sbjct 3432 GGATGTCTGAAGTTATTTTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGGCGA 3489 >seq1808 Length=441957 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||||| |||||||| | | |||||||||||||||||||||| Sbjct 81172 TTGAGACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 81231 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| | | || ||||| ||||||||||||| || || |||||||||||| Sbjct 81232 GGATGTCTGAAGTTATTCTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGG 81286 >seq1713 Length=249769 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||||| |||||||| | | |||||||||||||||||||||| Sbjct 865 TTGAGACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 924 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| | | || ||||| ||||||||||||| || || |||||||||||| Sbjct 925 GGATGTCTGAAGTTATTCTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGG 979 >seq1098 Length=35631 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625 ||| ||||||||||||||||| |||||||| | | |||||||||||||||||||||| Sbjct 3132 TTGAGACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGT 3191 Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||| | | || ||||| ||||||||||||| || || |||||||||||| Sbjct 3192 GGATGTCTGAAGTTATTCTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGG 3246 >seq1817 Length=913008 Score = 104 bits (114), Expect = 1e-19 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||||||||| |||||||| | | ||||||||||||||||||||||||| | Sbjct 656 ACCCGAAAGATGGTGACCTATGCCTAGTCAAGATGAAGCCAGAGGAAACTCTGGTGGATG 715 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 | || ||||| ||||||||||||| || || |||||||||||| Sbjct 716 TCTGAAGTTATTCTGACGTGCAAATCGATAATCTGATCTGGGTATAGGGG 765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079952574050