Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1688 93.3 4e-17 >seq1688 Length=4358 Score = 93.3 bits (102), Expect = 4e-17 Identities = 131/179 (73%), Gaps = 15/179 (8%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| |||||||| ||| |||||| | |||||||||||| | ||| Sbjct 3159 GGTGGATGCCTTGGCATCAGGAGGCGATGAAAGACGTGGCACGCTGCGAAAAGCCATGGG 3100 Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127 || || | | |||||||||| |||||| |||||||| |||| | || |||| Sbjct 3099 GAGCCGCGAGCAGGCATTGATCCGTGGATATCTGAATGGGGAGACCC-ACCTA---GAGA 3044 Query 128 TA--TATCATA-AC------GCTAGGCG--TTAGGCGAACGTGGGGAACTGAAACATCT 175 || ||||||| || |||| | | |||||||| ||||||||||||||||| Sbjct 3043 TAGGTATCATATACTGAATACATAGGTGTATGAGGCGAACCCGGGGAACTGAAACATCT 2985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476789787391