Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1688 150 2e-34 >seq1688 Length=4358 Score = 150 bits (166), Expect = 2e-34 Identities = 184/249 (74%), Gaps = 13/249 (5%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||||||||||||||||| |||||||| ||| || | | |||||||| Sbjct 1460 CTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCGTATACGTCGTCTCTC-GACTTCGCAC 1518 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | |||||||||||| |||||||||||| ||| || ||| || ||||| | Sbjct 1519 AGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTG------CCACCCG---- 1568 Query 121 ACACGTCGTTCACCA-GCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 ||| | ||| ||| | || | ||| |||||||||||| | || |||||| | Sbjct 1569 -CACATGGTTGCCCACATACGGGTCTCGCTTATCCCGAAGTTACACGAGCAATTTGCCTA 1627 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| | || |||| | | | |||||| |||| ||||||| | ||||||||||||| Sbjct 1628 GTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATACTCTACCAGTCCACCTGTGTCGG 1687 Query 240 TTTACGGTA 248 ||| |||| Sbjct 1688 TTTCGGGTA 1696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694385126603