Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1688 297 5e-78 >seq1688 Length=4358 Score = 297 bits (328), Expect = 5e-78 Identities = 318/421 (76%), Gaps = 27/421 (6%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||||||| | || ||||||||| ||||| | | ||||||||| Sbjct 1276 CGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGCCGATGCTGGAGACAGT 1335 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1336 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1395 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||||||||||| || | ||| Sbjct 1396 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAATGCT-------- 1447 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || || | | |||||||||||||||||||||||||||| || |||||||| || Sbjct 1448 -CTCACATCTCCTCTTAACCTTCCGGCACCGGGCAGGCGTCAGGCCGTATACGTCGTCTC 1506 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||| || ||| || ||||||||||| ||||||||||| | |||||| | | | ||| Sbjct 1507 TCGACTTCGCACAGCCCTGTGTTTTTACTAAACAGTCGCTACCCCCTGGTCTGTGCCACC 1566 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCA-CCGGCGCAC-CTTCTCCCGAAGTTA 358 ||| || | | ||| || ||| | | ||| ||||||||||| Sbjct 1567 CGCA-------------CATG---GTTGCCCACATACGGGTCTCGCTTATCCCGAAGTTA 1610 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | | |||||||||||||||| | |||||||||||||||||||||| |||||| Sbjct 1611 CACGAGCAATTTGCCTAGTTCCTTCAGCATCGTTCTCTCAAGCGCCTTGGTATACTCTAC 1670 Query 419 C 419 | Sbjct 1671 C 1671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260772123712