Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1688 331 3e-88 >seq1688 Length=4358 Score = 331 bits (366), Expect = 3e-88 Identities = 278/338 (82%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 161 TGATGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCG 220 || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4358 TGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGG-TTAAGTCCCGCAACGAGCG 4300 Query 221 CAACCCTTAAGCTTAGTTGCCATCAT--TAAGTTGGGCACTCTAAGTTGACTGCCGGTGA 278 ||||||| |||||||||| ||| | | ||||||||||| ||||||||||| Sbjct 4299 NAACCCTTGCCTTTAGTTGCCAGCATGTTTGGGTGGGCACTCTAGAGGAACTGCCGGTGA 4240 Query 279 CAAACCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACA 338 ||| ||||||||||||||||| |||||||| || ||||| ||||||||| ||||||||| Sbjct 4239 CAAGCCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGACCTGGGCTACA 4180 Query 339 CACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATA 398 ||||||||||||||| ||| ||| ||| | | | || || || ||| | | Sbjct 4179 CACGTGCTACAATGGCGGTGACAGTGGGAAGCTAGATGGTGACATCGTGCTGATCTCTAA 4120 Query 399 AAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAG 458 ||| | ||||||||||||||||| |||||||||||| | |||||| |||||||||||| Sbjct 4119 AAGCCG-TCTCAGTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGGTGGAATCGCTAG 4061 Query 459 TAATCGTAGATCAGCATGCTACGGTGAATACGTTCCCG 496 |||||| ||||||||||| ||||||||||||||||| Sbjct 4060 TAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCG 4023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503966746560