Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1688 147 4e-33 >seq1688 Length=4358 Score = 147 bits (162), Expect = 4e-33 Identities = 220/310 (71%), Gaps = 3/310 (1%) Strand=Plus/Minus Query 31 CGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCG 90 ||||||| | |||||| ||| |||| |||| ||| || ||| |||||||| Sbjct 1181 CGCCAGTTTGTGTGGAGCCATCCTTGAAATACCACCCTGACTGTTTTTGATGTCTAACCG 1122 Query 91 GACGACGTATAA-CCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGC 149 |||| ||| ||| |||||| || | |||||||||||||||||||||||| Sbjct 1121 --CGACCCGTAAGCCGGGTCCGGGACCCTGCATGGTGGGCAGTTTGACTGGGGCGGTCGC 1064 Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCA 209 ||||||||| ||||||||||||| | | | | |||| | || ||||||| | Sbjct 1063 CTCCCAAAGTGTAACGGAGGCGCGCGATGGTGGGCTCAAGTCGGTCGGAAACCGACTGTT 1004 Query 210 CAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGT 269 ||||||| |||| ||| | |||||| || | || || | ||| ||||||||| Sbjct 1003 GAGTGCAATGGCATAAGCCCGCCTGACTGTGAGAGTGACAGCTCGAACAGAGACGAAAGT 944 Query 270 CGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTAC 329 ||| | || |||||||| ||| | |||| |||| |||||| ||||||||||| ||| Sbjct 943 CGGCCATAGTGATCCGGTGGTCCCACGTGGACGGGCCATCGCTCAACGGATAAAAGGTAC 884 Query 330 CCTGGGGATA 339 || |||||| Sbjct 883 TCTAGGGATA 874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982378279136