Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1688 439 9e-121 >seq1688 Length=4358 Score = 439 bits (486), Expect = 9e-121 Identities = 457/592 (77%), Gaps = 18/592 (3%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| | ||| |||| ||| | |||| | |||| |||| ||| | ||| ||||| Sbjct 2227 TCGACAATGGACCTTAGCACCCATC-GTCTGTCTGCCGTGCTCATACTCCTCGGTATTCG 2285 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATCCAGTGCTCTACCTCC 119 |||||||||| || |||||| | ||||||||| ||| ||||||||||||||||| || Sbjct 2286 GAGTTTGGTTAGGTTTGGTAAGGCTTTGGGCCCCCCTAGCCCATCCAGTGCTCTACCCCC 2345 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 | | | || || ||||| | |||| ||| |||||| ||||||||||||||| | || Sbjct 2346 GAGG-GTAATACACGACGATCTACCTCAATAGATTTCGCGGAGAACCAGCTATCTCCGAG 2404 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| |||||| |||||||| |||||||| |||||| Sbjct 2405 TTTGATTGGCCTTTCACCCCTAGCCACAGCTCATCCCCGACTTTTTCAACAGGCGTGGGT 2464 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||| |||||| || ||||| ||||| |||| |||||| ||||||||| | || Sbjct 2465 TCGGCCCTCCAGTGCGTGTTACCGCACCTTCAGCCTGGCCATGGCTAGATCACTCGGTTT 2524 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359 |||||||| | || |||||| |||||||||| |||||||||||||| || ||| || Sbjct 2525 CGGGTCTTCTGCCAGCAACTCATTCGCCCTATTCAGACTCGCTTTCGCTTCGCTTACACC 2584 Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 |||| ||| ||||| || ||| |||||||| | | |||| | ||||||| ||||| Sbjct 2585 TAACGGCTTAGGCTCGCTGCA-AACAGAAACTCGCTGACCCATTATACAAAAGGTACGCC 2643 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 |||||| | ||| || |||||||| | ||||||||| ||||||||||| Sbjct 2644 GTCACC----CCATAAGAG--------GCTCCGACTGCTTGTAGGCATTTGGTTTCAGGT 2691 Query 480 ACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 || ||||||||||| | ||||| |||||||||||||||||||||||||||| | ||| Sbjct 2692 -CTCTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTA 2750 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 ||||||| || ||||||||||||||| |||||||||| ||| |||| || Sbjct 2751 TCGGTCATCAGGGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGAC 2802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817559812864