Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1688 331 2e-88 >seq1688 Length=4358 Score = 331 bits (366), Expect = 2e-88 Identities = 334/417 (80%), Gaps = 22/417 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| || ||||||||||| | || ||||||| |||||||| || ||| Sbjct 2428 CCACAGCTCATCCCCG--ACTTTTTCAACAGGCGTGGGTTCGGCCCTCCAGTGCGT-GTT 2484 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| || |||| |||| || |||||| | |||||| ||||||| | | ||||| Sbjct 2485 ACCGCACCTT-CAGCCTGGCCAT-GGCTAGATCACTCGGTTT-CGGGTCT-TCTGCCAGC 2540 Query 129 GACT-AGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 ||| | ||||||| | ||||||||||| |||| ||| | | |||| | ||| ||| Sbjct 2541 AACTCATTCGCCCTATTCAGACTCGCTTT-CGCTTCGCTTACACCTAACGGCTTAGGCT- 2598 Query 187 TGCCACTGAAAATA---AGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 | ||| ||| | | |||||||||||||||||||||||||||| ||||||| | || Sbjct 2599 ---CGCTGCAAACAGAAACTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCATAA 2655 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 |||||| |||||||||| |||| ||||||||| ||| ||||||||||||| ||| Sbjct 2656 GA--GGCTCCGACTGCTTGTAGGCATTTGGTTTCAGG-TCTCTTTCACTCCCCTCATCGG 2712 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCA-GTAGTATTTA 362 ||| |||||| |||||||||||||||||| ||||||||||||||| ||| | |||||||| Sbjct 2713 GGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCA-TCAGGGAGTATTTA 2771 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | |||||||| |||||||||||| |||||||| ||||| ||||| ||| ||||||| Sbjct 2772 GGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 2828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241572548224