Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2159 87.8 1e-15 seq2137 87.8 1e-15 seq1098 87.8 1e-15 seq1843 84.2 1e-14 >seq2159 Length=947710 Score = 87.8 bits (96), Expect = 1e-15 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 945992 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 946049 Query 108 GTAAT 112 ||||| Sbjct 946050 GTAAT 946054 >seq2137 Length=1626465 Score = 87.8 bits (96), Expect = 1e-15 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 232 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 289 Query 108 GTAAT 112 ||||| Sbjct 290 GTAAT 294 >seq1098 Length=35631 Score = 87.8 bits (96), Expect = 1e-15 Identities = 60/65 (92%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1517 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 1460 Query 108 GTAAT 112 ||||| Sbjct 1459 GTAAT 1455 >seq1843 Length=49071 Score = 84.2 bits (92), Expect = 1e-14 Identities = 59/65 (91%), Gaps = 2/65 (3%) Strand=Plus/Minus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||| ||| ||||||||||| ||||||||||||||||||| Sbjct 4922 TCTCACTAAACCATT-CAATCGGTGGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 4865 Query 108 GTAAT 112 ||||| Sbjct 4864 GTAAT 4860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300793764980