Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq1688 248 2e-63 >seq1688 Length=4358 Score = 248 bits (274), Expect = 2e-63 Identities = 309/413 (75%), Gaps = 14/413 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||| || ||| |||||||||||| ||| || |||| | | || ||| | | Sbjct 1818 CGACTACGGCTTTCGCCCTCGCCTTAGGGGCCGGCTTACCCTGCGTGGATTAACCTTGCG 1877 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | ||| | | | || ||||||||||| | Sbjct 1878 CAGGAACCCTTGGACTTTCGGCGACAGTGTTTCTCGCACTGTTTGTCGCTACTCATGTCA 1937 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGG-CAGCTTCACC-ACTGACAC 177 |||||| |||| | | ||||| | | ||||||| | | |||| | ||| || Sbjct 1938 GCATTCGCACTTCCGATATCTCCAG-AGAGGGTCACCCCGTCTCCTTCGCAGACTTACGG 1996 Query 178 GACGCTCCCCTACC---CAACCACA-CAGGTTGC---CACAGCTTCGGCGGATAACTTAA 230 ||||||| ||||| || | | ||| ||| |||||||||||| | ||| | Sbjct 1997 AACGCTCCGCTACCGCGCATACTTATCAGTATGCACCCACAGCTTCGGCACGTGGCTTGA 2056 Query 231 GCCCCGCTACATTATCGGCGC--GGAATCACTT-GACCAGTGAGCTATTACGCACTCTTT 287 |||||| |||||| ||||||| || || || ||||||||||||||||||| ||||| Sbjct 2057 GCCCCGTTACATTTTCGGCGCAGGGTTTCTATTAGACCAGTGAGCTATTACGCTTTCTTT 2116 Query 288 CAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCC 347 ||||||||||||||| ||||||||||||||||||| | | | | |||||||||||||| Sbjct 2117 AAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAATCCCCACATCCTTTCCC 2176 Query 348 ACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| || ||| | |||||||||||||||| || |||||||||||||||||||| Sbjct 2177 ACTTAGCCACGATTTAGGGGCCTTAGCTGGTGGTCTGGGCTGTTTCCCTCTCG 2229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177573963264