Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1688 149 1e-33 >seq1688 Length=4358 Score = 149 bits (164), Expect = 1e-33 Identities = 235/325 (72%), Gaps = 15/325 (5%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTAC-AGGCGATGAAGGACGTAGTAGCTTGCGAT 59 || ||| |||||||||||||||| || | |||||||||| ||||| | | ||||| Sbjct 3168 AGGGCATTTGGTGGATGCCTTGGC-ATCAGGAGGCGATGAAAGACGTGGCACGCTGCGAA 3110 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 |||| |||||| || | || | |||||||| ||| || ||||||||| |||| Sbjct 3109 AAGCCATGGGGAGCC-GCGAGCAGGCATTGATCCGTGGATATCTGAATGGGGAGACCCA- 3052 Query 120 CCCTT----TGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACT 175 ||| | ||| || || |||||||||||||| | | |||||| ||| ||||| Sbjct 3051 -CCTAGAGATAGGT-ATCATATACTGAATACATAGGTGTATGAGGCGAACCCGGGGAACT 2994 Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235 ||||||||| | || | | ||||||||| |||||| |||||||| ||||||||||||| Sbjct 2993 GAAACATCTCATTACCCGGAGGAAAAGACATCAACAGAGATTCCGTTAGTAGTGGCGAGC 2934 Query 236 GAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAA-TAGG 294 ||| ||| ||| | | || | ||||| || || ||| |||||||| | | Sbjct 2933 GAACGCGGAGGAGGC--CAGTAGGTTATTGAAGAGA-AGCAGAACAGTCTGGAAAGTCTG 2877 Query 295 AGCCATAGCGGGTGATAGCCCCGTA 319 | | | || ||||||||| |||||| Sbjct 2876 A-CGACAGAGGGTGATAGTCCCGTA 2853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918379694176