Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1688 370 4e-100 >seq1688 Length=4358 Score = 370 bits (410), Expect = 4e-100 Identities = 421/565 (75%), Gaps = 21/565 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||| | |||| |||||| || ||| ||| || |||||| || | || || Sbjct 958 TCGAGCTGTCACTCTCACAGTCAGGCGGGCTTATGCCATTGCACTCAACAGTCGGTTTCC 1017 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| |||| ||| | | |||||||||||||| ||||||||| | |||||||||| Sbjct 1018 GACCGACTTGAGCCCACCATCGCGCGCCTCCGTTACACTTTGGGAGG-CGACCGCCCCAG 1076 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||| ||||||| ||| ||||| |||| | | | ||| | ||||||| ||| | Sbjct 1077 TCAAACTGCCCACCATGCAGGGTCCCGGACCCGGCTTACGGGTCGCGGTTAGACATCAAA 1136 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 || ||||| |||||||||||| | | ||||||| ||| ||| || |||||| Sbjct 1137 AACAGTCAGGGTGGTATTTCAAGGATGGCTCCACACAAACTGGCGCCCATGCTTCATAGC 1196 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 ||||||||||||||||||| | | | |||||| | | ||||| ||| ||||| | Sbjct 1197 CTCCCACCTATCCTACACAGAATGTCTCTGATGCCACTGCAAAGCTGCAGTAAAGGTTCA 1256 Query 301 G-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 |||||||| |||| ||||| | | | ||||||| || | | | ||||||| | | Sbjct 1257 TAGGGTCTTTCCGTCTGACCGCGGGTACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 1316 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 ||| || | ||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 1317 AGCCGATGCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 1376 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 1377 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTC 1436 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 ||| ||| || ||||| ||||||||||||||| |||||| Sbjct 1437 AAT--------TCA-----------ATGCTCTCACATCTCCTCTTAACCTTCCGGCACCG 1477 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||| |||||||| ||| Sbjct 1478 GGCAGGCGTCAGGCCGTATACGTCG 1502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702362359936