Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galendromus_20occidentalis_20[refseq_20GCF_5F000255335.1_202012-03- 27] 2,211 sequences; 151,724,311 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq614 309 2e-79 seq946 250 2e-61 >seq614 Length=536467 Score = 309 bits (342), Expect = 2e-79 Identities = 1205/1876 (64%), Gaps = 55/1876 (3%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| ||||| | || || | ||| || || | |||||||| ||||| Sbjct 529851 TCGACAGTGAACTGAATCGCCTGGGCGGCGGGCTTCGTTCTCAAGTAGTACATCCCGGTT 529910 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | || ||| | |||||||||||||| | | || | | || | |||| Sbjct 529911 TTCAAACCGAGTTTCCAGCCGTAGAAATGCATCGACGTGAGCTTCCCGAAGTTGGTCTCG 529970 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACC-ACGATCTGCAGCCAT 65256 || | || || |||| || || |||||||||||| |||| || ||| || || ||||| Sbjct 529971 GCGAAGTGGATGTTCAGAGATTGGCTCTGATCGATG-AACGCCCCACGGTCAGCCGCCAT 530029 Query 65257 GTCAATGATACGACGTCCCGAT--ATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 | ||||| | | | || | ||||| |||||| ||| || | | | | Sbjct 530030 TTTGATGAT--GTTCTTCTGAGGCAGTTCCCAAACGGTCCGGTAGAGTTGTTTCAATTTA 530087 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || || || | ||| || ||||| | || | || || |||| Sbjct 530088 TCAGGGATATC---AAGATTCTGCACGGAACCGTTGCTAGCGACAAGCTCGTTCTTCATC 530144 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 | || ||| | ||||| ||| | |||| | | | ||| |||||| || |||| Sbjct 530145 GTTTCGTTCCAGAGGCCCAAGTCGGTGAGATCCTTCAGGAGGTGGTGATTGACGATTTGG 530204 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || ||||| || || || | | |||| | |||| |||| || |||| ||| || Sbjct 530205 AATTCACCGGAGAGAACTCGTCTGGCATACACGTTGCTCGTGTACGGCTCAATGGACTCG 530264 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||||| || || || || || ||||| || |||||||| || | || || || Sbjct 530265 TTGTTGCCGAGGATCTGAGCCGTTGATGCTGTGGGCATGGGCGCCAGCAGCAGACTATTC 530324 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA--TCGGTTTAT 65612 || | ||||| | | || || || | ||||||||| ||| | |||| || Sbjct 530325 CGGATTCCGTGCTGGGCGATTTTTCTCCGAAGACCGTCCCAGTCCCAGAGGTCGG---AT 530381 Query 65613 CG-TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | | ||||| | ||||| || || ||||| | || | | | || | ||| Sbjct 530382 GGCTTGACATTC------CACATGTCATGCTGCAGAATCCCCTTTGAGACGGGGCAGCCG 530435 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | ||||| ||| | | || || | ||||| | || | || || Sbjct 530436 GCGTATGTCTCGTAGGTTCCGTGGATTTCCGCGAGCTCGCAGCTTGCTTCCAACGCAGCG 530495 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791 ||||| ||||| ||||| || | || || || || || ||| ||| | || Sbjct 530496 AAATAGATGGTTTCGAAGATTTTGCTGTTCAGATCCATCGCTTCCGGGCTGTCGAAAGG- 530554 Query 65792 ATACC-CATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 ||||| |||||||| || | ||||||||||| || || || || ||||| || ||||| Sbjct 530555 ATACCGCATCAGGATGAACGCATCGGCCAGACCCTGGACACCGATTCCGATCGGTCGATG 530614 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 | | ||| ||| || || || || || ||||| ||||| ||||| || || Sbjct 530615 TCTCTTGTTGCTTCGTTCGGCTTCCGGCACGGGATAGTAGTTGATGTCGATGATTTTGTT 530674 Query 65911 CAAATTGCGTGTCACCACAT-GCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAG 65969 | || || || | | | | | | | || |||| ||||| || ||| Sbjct 530675 GAGGTTTCGCGTGATGGCTTTGGTCACTTC-TCTCAATCTCTCGAAGTCGAAAGC----- 530728 Query 65970 GACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGA 66029 | || ||| | ||| || | ||||| | || || | |||||||| Sbjct 530729 GCCG-TCGTG------------CACGAAGCGGTTGAGGGCCACCGAAGCCAAGTTGCAGA 530775 Query 66030 CAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTA 66089 | || |||||||| || | | |||||||| ||||| ||||| ||||| ||| | Sbjct 530776 CCGCGATCTCGTCTGGCGACGAGTACTCGACGATTTCTGTGCAAAGATTCGAGCACTTGA 530835 Query 66090 TGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACG 66149 |||| || | ||||||||| || |||||||| ||||| || |||||||||| |||||||| Sbjct 530836 TGGTCCCGAGATTCTGTTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTACAGCATGTACG 530895 Query 66150 GAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA----GCGCGTGCCTTC 66205 | || ||||| || | || || | ||| | | ||| || | |||| | Sbjct 530896 GGGTCCCGGTTTCGATCTGACTTTCCAGGATCGTATACCACAGTTTCTGGGCGTCGATCT 530955 Query 66206 ACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCA 66265 || | ||| || ||| |||| || || |||||||| | ||||| || Sbjct 530956 GGCGGATGTAACGGCCTTCCTTC----TCATAGCCCTCGTAGAGTTTCTCGAACTCGTCG 531011 Query 66266 CCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCC 66325 ||||| || || | || ||| | | |||||||| |||||||| | || | Sbjct 531012 CCCCACGTGTCACTGAGGCCCGGGCACGTATTGGGACACATGAGCGACCACTTGCCGTTT 531071 Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 ||||| || || ||| || || || || ||||| |||||||||||||| ||||| || Sbjct 531072 TGTTCAACGCGTTTCATGAACAGGTCCGGAATCCACAGGGCGTAGAAGAGGTCGCGGGCA 531131 Query 66386 CGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATG 66444 || ||| || ||||| ||| ||||| || | || | |||||| || || ||| | || Sbjct 531132 CGCATCTCTTCGATGCCAGTG-TTTTTACGGAGATCCAAGAACTCGAAAATATCGCCGTG 531190 Query 66445 CCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTA 66504 ||| || || || ||||||||||| | ||| |||||| ||| || ||||||||||| Sbjct 531191 CCACGGCTCGAGATAGATGGCGAAAGCGCCGGGTCGTTTGTTGCCGCCCTGGTCGACGTA 531250 Query 66505 GCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGT 66564 ||||||| |||||||| || |||| ||| || |||| ||||| || | || || || Sbjct 531251 GCGAGCGGTGTTGTTGAAAACTCGCAGCATGGGAACGATACCGTTCGACGTCCCGTTCGT 531310 Query 66565 GCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 ||| ||||| || || ||| | || || || | || | |||||||||||||| Sbjct 531311 CCCGGCGATGTAAGAGCC-CGTAGGTCGAATGCAATGGATGTTTACACCAATACCACCGG 531369 Query 66624 CCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCAC 66683 | | |||||||| ||| || | | || || | | || || || || || ||| Sbjct 531370 CGGATTTCGAGATCAGAGCGCATTGGCTCAGCGTTTCGTAGATCCCTTCGATAGAATCAT 531429 Query 66684 CCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGA 66743 |||| || ||||| ||| | || || || | || || | || | || ||| | Sbjct 531430 CCTTCATTGTCAGCAGGAAACAGGAGCTCAACTGTGGGCGGCAAGTACCCGCGTTGAACA 531489 Query 66744 GGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAG 66803 | || || | ||||| || || | | |||| | ||||| ||||||||| | | Sbjct 531490 GCGTCGGACTGGCGTGGGTGAACCATTTCTCGCTCATGAAGTTGTAGGTCTCGATGGCGG 531549 Query 66804 CATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTT 66863 | || | || || || ||||| |||| | | |||||||| | || ||||| | | Sbjct 531550 CCTCCACGTCGTCACCGTGAATTCCGACCGAAACGCGCATCAGCATGTGCTGAGGTCTCT 531609 Query 66864 CGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGT 66923 |||| | | | | ||| | | | |||||| || || ||||| || || |||| Sbjct 531610 CGACGATTTTACCGTCGATTTTTAGGAGGTAGGATCGCTCGAGGGTTCGGAATCCGAAGT 531669 Query 66924 ACGAGTAATTGAAATC 66939 | ||| ||||| || Sbjct 531670 AGTTGTAGTTGAAGTC 531685 Score = 82.4 bits (90), Expect = 6e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 67060 CGTCTGCTTGTGCATGTTGGAGATGGCGATACGGGCGGCCAGGACACCATAATCGGGATG 67119 ||||| |||||||| |||||||| ||||| || ||||| || || ||||||| ||||| Sbjct 531960 CGTCTCCTTGTGCAGATTGGAGATTGCGATCCGCGCGGCTAGAACTGCATAATCTGGATG 532019 Query 67120 TAGAGTCATCATACTGGCGGCAGTTTCAGCGGCCA 67154 || ||||| | || |||||||||||||||| Sbjct 532020 CTTCGTGGTCATAGTAGCCGCAGTTTCAGCGGCCA 532054 >seq946 Length=1044653 Score = 250 bits (276), Expect = 2e-61 Identities = 455/663 (69%), Gaps = 5/663 (1%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 || ||||| || || |||| || || || |||||||||||||| | |||||||| Sbjct 23700 CAAGAGGTTCAGGTCACGGAAGCTCGCTGCTTCTACGGCTTCCAAGTCATGATGGAGAAC 23759 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGT 61389 | || ||||| |||||| | || || |||| ||||||| ||| | | ||||||| Sbjct 23760 ATTCATTCGGAAATGTACTCGTTGCTGCTCAATACCTACATCACGGATCCGATGGAACGT 23819 Query 61390 GAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCC 61449 || | | |||| ||||||||||| || || | ||| |||||| ||||||||| Sbjct 23820 GATCATCTATTCAGGGCCATCGAGACCATGCCATGCATCAAGAAGAAAGCTGATTGGGCC 23879 Query 61450 TTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 | ||||||||| | | | ||||| | || ||||| | |||| || |||| | Sbjct 23880 CTGAATTGGATCGGGAATCAGAATGCTACCTACGGAGAACGTGTCGTGGCGTTCGCGGCG 23939 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGA 61569 ||||| || | || ||||||||| |||| || | || || ||| | |||||||| || Sbjct 23940 GTCGAAGGGATTTTCTTCAGTGGAGCGTTCGCTTCGATATTCTGGCTCAAGAAACGCGGT 23999 Query 61570 CTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGT 61629 || |||||||| |||| ||||| || ||| | || || | ||||||||| | ||| Sbjct 24000 CTGATGCCCGGATTGACTTTCAGTAACGAGCTAATTTCGAGAGACGAGGGCCTCCATACC 24059 Query 61630 GATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTG 61689 ||||| ||| | | |||| || || | || | ||||| | ||||| | Sbjct 24060 GATTTCGCTTGCCTTATGTTCAGACACT---TAGTCCAGAAACCGTCCGTAGAGCGGATC 24116 Query 61690 GGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCC 61749 |||||| | || | || || | ||||| ||||| || || || || ||||| || Sbjct 24117 TATGAGATCATCCGCAACGCCGTTGCGATCGAGCAGGAGTTCCTCACCGAAGCTTTACCG 24176 Query 61750 GTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 | | | |||| |||||||||| || ||| || || || |||||||| ||||| Sbjct 24177 TGCGCGATGCTCGGTATGAATTGTGATCTCATGAAACAATACATAGAATTTGTCGCCGAT 24236 Query 61810 CGTCTGTTGGTCGA-TTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTT 61868 || |||||||| || | | || | | | | | || | | || ||||||||||| Sbjct 24237 CGACTGTTGGTTGAGCTCGAGTGCG-ACAAGTTGTGGAACAGTCAGAATCCATTTGATTT 24295 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTA 61928 |||||| || ||| |||| || |||||||| || ||||||||||| || ||||| || Sbjct 24296 CATGGAGCAAATCTCGTTGGAGGGGAAGACGAACTTCTTCGAGAAACGCGTCGGCGAGTA 24355 Query 61929 TCA 61931 || Sbjct 24356 CCA 24358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397557286909040