Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq17938 183 6e-44 seq1822 127 4e-27 >seq17938 Length=2741 Score = 183 bits (202), Expect = 6e-44 Identities = 236/324 (73%), Gaps = 9/324 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||| ||||||||| | | Sbjct 1468 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAAAAGTCGGAGCCC---GCAAGG 1412 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||||||||| ||||||| |||||| | | ||| ||| ||| |||||||||| Sbjct 1411 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCGAGGTTAACC 1353 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || |||||||| |||| |||| | || |||||| | ||| | ||| Sbjct 1352 GAATAGGGA-----AGCCGAAGAGAAATCGAGTCCGAATAGGGCGTCTAGTCGCTGGGTG 1298 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| ||| | |||| ||||| |||||||| || ||| Sbjct 1297 TAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTGCGGTAACACGCACTGG 1238 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||| |||||||| || |||| ||| || ||||||| | || |||||||||||||| Sbjct 1237 AGGTCCGAACCGACTAATGTTGCAAAATTAGCGGATGAGCTGTGGATAGGGGTGAAAGGC 1178 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 || |||||| |||||||||| || Sbjct 1177 TAAACAAACTTGGAAATAGCTGGT 1154 >seq1822 Length=724184 Score = 127 bits (140), Expect = 4e-27 Identities = 190/265 (72%), Gaps = 6/265 (2%) Strand=Plus/Minus Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| |||||||||||||| | | ||||||| || | ||| || ||||| Sbjct 157560 GTGACAGCGTACCTTTTGCATAATGGGTCAGCGAGTTAATC-TATGAAGCAAGCTTAAGC 157502 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 || ||| ||| || || |||||| || || || |||||| |||| | Sbjct 157501 CGTT-AGGTG---TAGGCGTAGCGAAAGCAAGTCTGAATAGGGCGTGTTAGTTTTATGGA 157446 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| || || ||| |||||| ||||| | | || Sbjct 157445 TTAGACCCGAAACCAAGTGATCTAGTCATGACCAGATTGAAGGTATGGTAAAACATACTG 157386 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||| || || |||| || || | |||||| | | | ||||||||||||| Sbjct 157385 AAGGATCGAACCAGTTAATGTTGCAACATTATTGGATGAGTTGTGATTAGGGGTGAAAGG 157326 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||| |||||||||| || Sbjct 157325 CCAATCAAACTTGGAAATAGCTGGT 157301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972602920448