Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq17938 82.4 5e-14 seq1822 71.6 1e-10 >seq17938 Length=2741 Score = 82.4 bits (90), Expect = 5e-14 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||| ||| | | ||||||| |||||||| Sbjct 2656 TACGGCTACCTTGTTACGACTTCACCCCAGTCACGAACCCCGCCGTGGTAATCGCCCTCC 2715 Query 78 CGAAGGTTAAGCTACCTACTTCT 100 ||||| |||| |||||||| Sbjct 2716 TTGCGGTTAGGCTAACTACTTCT 2738 >seq1822 Length=724184 Score = 71.6 bits (78), Expect = 1e-10 Identities = 90/124 (73%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||| | ||||||||| ||||||||||||||||| ||| || | | | || Sbjct 256703 CCCTACTGCTACCTTGTTACGACTTCACCCCAGTCACTGATCCCACTTTAAATAACTCCT 256762 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| || | |||| || |||| | |||||||| ||||||||| ||| Sbjct 256763 TCCTTACGGTTAGGCCATTAGCTTCGAGTGAAACCAATTCCCATGGCGTGACGGGCAGTG 256822 Query 135 TGTA 138 |||| Sbjct 256823 TGTA 256826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345534360840