Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4471 262 6e-68 seq1750 176 7e-42 >seq4471 Length=24596 Score = 262 bits (290), Expect = 6e-68 Identities = 199/229 (87%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| |||||| ||| |||||||||||| | Sbjct 17902 GTACAAAGGGCAGGGACGTAATCAACGCGAGCT-GATGACCCGCATTTACTAGGAATT-C 17845 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAA-ATTTCAAAGATT 119 |||||| |||| || ||||||||| ||||||||| ||||||| | ||||||| |||| Sbjct 17844 CTCGTTCAAGATTAATAATTGCAATAATCTATCCCTATCACGACATACATTTCAA-GATT 17786 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||||||| |||| ||||| || |||||||| || |||||||||||||||||| Sbjct 17785 ACCCGGACCTTTCGGACAAGGAGA---ACTCGTTGCGTATGTCAGTGTAGCGCGCGTGCA 17729 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 17728 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCCCCAACTTCC 17680 >seq1750 Length=152056 Score = 176 bits (194), Expect = 7e-42 Identities = 180/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||| || || | |||| || ||||||||||| ||| | Sbjct 2423 GTACAAAGGGCAGGGACTTAATCAGCGGGAAGTA-ATGATTCCCGCTTACTAGGCATT-C 2366 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||||||| | || |||||||| | ||||| | ||||| | | |||||| | || Sbjct 2365 CTCGTTGGTGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGTTTCAACGGGTT 2306 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||| ||||| | | || |||||| | |||||||||||||||||| Sbjct 2305 ACCCGGCCCTCTCGAGCAAGGAAA-ACACACGTTGATACCTTCAGTGTAGCGCGCGTGCT 2247 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||| ||||||||||||||||| | |||||| Sbjct 2246 GCCCAGAACATCTAAGGGCATTACAGACCTGTTATTGCCCC--ACTTCC 2200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751852413185