Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq4471 138 6e-31 seq1750 75.2 6e-12 >seq4471 Length=24596 Score = 138 bits (152), Expect = 6e-31 Identities = 101/117 (86%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || ||||| |||| |||| | || Sbjct 17375 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGATGGAGTCGAAAT---AACAACCACC 17319 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 17318 AATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 17262 >seq1750 Length=152056 Score = 75.2 bits (82), Expect = 6e-12 Identities = 90/119 (76%), Gaps = 5/119 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAA-ATGATA-ACATCGC 58 ||||||||| |||||| |||| || | | |||| || | || | || | ||| || Sbjct 1884 GAACCCAAAAACTTTGGTTTCCCGGAGGCTGCCCGCCGTGACATGTAAGACACACAGCG- 1826 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||||||||| ||||| |||| | ||||||||||||| |||||| Sbjct 1825 --GATCGCTAGTTGGCATAGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 1769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278347124010