Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4471 275 1e-71 seq1750 208 1e-51 >seq4471 Length=24596 Score = 275 bits (304), Expect = 1e-71 Identities = 212/247 (86%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC--TCGAATACATTAGCATG 131 |||||| ||| ||| ||||||||||||||||||| | ||| | ||||||||||||||| Sbjct 17018 TTTACTGTGAGTAAACTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATACATTAGCATG 17077 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||| ||| ||| | | |||||||||||||||| || || ||||||||| Sbjct 17078 GAATAATAAGATAAGACTTTGG--TCTATTTTGTTGGTTTATATT-CCAAGGTAATGATT 17134 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| |||||| | |||||| |||||||||||||||||||||||||||||| Sbjct 17135 AATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTATT 17194 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 |||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||| Sbjct 17195 GAAGACAAACTACTGCGAAAGCATTTACCAAGGATGTTTTCATTAATCA-AGAACGAAAG 17253 Query 312 TTAGGGG 318 ||||||| Sbjct 17254 TTAGGGG 17260 >seq1750 Length=152056 Score = 208 bits (230), Expect = 1e-51 Identities = 221/285 (78%), Gaps = 10/285 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | || ||| | || ||||||||||| |||||| ||| | Sbjct 1487 TGCTCTTAACTGAGTGTCGTGCGG-GCCGGCACGTTTACTTTGAACAAATTAACGTGCTT 1545 Query 100 AAAGCAGGCCTTTG----CTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 || ||||||||||| | ||||||| | |||||||||||| ||||||||| | |||| Sbjct 1546 AACGCAGGCCTTTGTCTGCCCGAATACTCTTGCATGGAATAATGGAATAGGACCT-CGGT 1604 Query 156 TCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTC 213 |||||||||||||||| | ||| || |||||||||||| ||||| | |||||| || Sbjct 1605 TCTATTTTGTTGGTTT-TCGGAAGTCGAGGTAATGATTAATGGGGATTGCCGGGGGCATC 1663 Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 ||||| || ||||||||||||||||||| ||||| |||| |||||||| Sbjct 1664 CGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACTGGAGCGAAAGC 1723 Query 274 GTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| ||||| |||||||| ||||||| ||||||||||||| || Sbjct 1724 GTTTGCCAAGTATGTTTTCTTTAATCA-AGAACGAAAGTTAGAGG 1767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915014589632