Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq17938 111 1e-22 seq1822 87.8 2e-15 >seq17938 Length=2741 Score = 111 bits (122), Expect = 1e-22 Identities = 136/181 (75%), Gaps = 10/181 (6%) Strand=Plus/Minus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||||||||||||| |||||||||||| |||| Sbjct 1933 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGATAGCCTGCGAAAAGCTTCGGG 1874 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 || ||||| || | |||||||| |||||||||||||||| ||||| || | | Sbjct 1873 GAGCTGGCAAATTAGCTTTGATCCGGAGATATCCGAATGGGGAAACCC--ACCCTTAGGG 1816 Query 127 ATATATCAT----AACGC-TAGGC--GTTAGGCGAACGTGGGGAACTGAAACATCTAAGT 179 ||| ||| || | ||||| | |||||||| | |||||||||||||||||| Sbjct 1815 GTATCGCATGCTGAATACATAGGCATGCGAGGCGAACCGAGTGAACTGAAACATCTAAGT 1756 Query 180 A 180 | Sbjct 1755 A 1755 >seq1822 Length=724184 Score = 87.8 bits (96), Expect = 2e-15 Identities = 128/175 (73%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69 ||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| ||| | Sbjct 158080 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGTGGGAA 158021 Query 70 -TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGA-TATATTGGAGA 127 ||| || | | | |||||||| |||| ||||||||||| ||||| | || || | | Sbjct 158020 ATTGTCA-ACAAGTTTTGATCCGCAGATTTCCGAATGGGGAAACCCAACTAGCTTAGCTA 157962 Query 128 TATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 ||| || | ||| | | | || ||| ||| ||||||||| ||||||||| Sbjct 157961 GTTATTAT-ATACTAAGTATATAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 157908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476706423679