Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq14106 152 5e-35 seq17938 149 6e-34 seq1822 129 6e-28 >seq14106 Length=4562 Score = 152 bits (168), Expect = 5e-35 Identities = 89/92 (97%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 67 TGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 126 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1388 TGCGACTGTTTATCAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTG 1447 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 || |||||||||||| |||||||||||||||| Sbjct 1448 ACTCCTGCCCGGTGCTGGAAGGTTAATTGATG 1479 >seq17938 Length=2741 Score = 149 bits (164), Expect = 6e-34 Identities = 100/112 (89%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| ||| | || |||||||||||||| |||||||||||||||||||||| |||| Sbjct 225 GGTCGCAGAGAATCGGTGGCTGCGACTGTTTAATAAAAACACAGCACTCTGCAAAGACGA 166 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||| |||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 165 AAGTCGACGTATAGGGTGTGACGCCTGCCCGGTGCTGGAAGATTAATTGATG 114 >seq1822 Length=724184 Score = 129 bits (142), Expect = 6e-28 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||| Sbjct 156446 GCGACTGTTTACTAAAAACACAGGACTCTGCAAACACGTAAGTGGAAGTATAGGGTCTGA 156387 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAAT 153 |||||||||||||| ||||||||||| Sbjct 156386 CGCCTGCCCGGTGCTGGAAGGTTAAT 156361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476706423679