Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1822 482 7e-134 >seq1822 Length=724184 Score = 482 bits (534), Expect = 7e-134 Identities = 414/505 (82%), Gaps = 15/505 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 257332 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 257273 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCC---TCTGACCC 117 |||||||||||||| |||||||||| |||||||||| ||||||||| || ||| Sbjct 257272 GTGGTTTAATTCGATGCAACGCGAAAAACCTTACCACTTCTTGACATGGAAATCATACCT 257213 Query 118 CT-CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG---ACAGGTGATGCATGGTTG 173 | | | || | ||| | ||||| | || | ||| ||| ||||||| || Sbjct 257212 ATTCGAAAGGATGGGGT---CGGTTCGGCCG---GATTTTACACAAGTGTTGCATGGCTG 257159 Query 174 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCT 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 257158 TCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCCT 257099 Query 234 TAGTTGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAA 291 ||||||||||| ||| | || ||||| |||| |||||| |||| || | ||||||| Sbjct 257098 TAGTTGCCATCGGGTAATGCTGAGCACTTTAAGGAAACTGCCAGTGATAAGCTGGAGGAA 257039 Query 292 GGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAAT 351 |||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct 257038 GGTGGGGATGATGTCAAGTCATCATGGCCTTTATGGAGTGGGCTACACACGTGCTACAAT 256979 Query 352 GGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAG 411 || ||||| |||| || || |||||||| |||| |||||| |||| |||||| Sbjct 256978 GGTGGCTACAATGGGCTGCAAAGCCGCGAGGCTAAGCTAATCCCTTAAAAGCCATCTCAG 256919 Query 412 TTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCA 471 ||||||||||| |||||||||||| || |||||| ||||||||||||||||||| ||||| Sbjct 256918 TTCGGATTGTACTCTGCAACTCGAGTACATGAAGTTGGAATCGCTAGTAATCGTGGATCA 256859 Query 472 GCATGCTACGGTGAATACGTTCCCG 496 |||||| ||||||||||||||| || Sbjct 256858 GCATGCCACGGTGAATACGTTCTCG 256834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503695304640