Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq14106 203 6e-50 seq1822 145 1e-32 >seq14106 Length=4562 Score = 203 bits (224), Expect = 6e-50 Identities = 238/315 (76%), Gaps = 10/315 (3%) Strand=Plus/Plus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACC 89 |||| ||| | | |||||| ||| |||| |||| || | | ||| |||||||| Sbjct 1763 ACGCTAGTTCTGATGGAGCCAACCTTGAAATACCACCCTGGTAATTTCGGAGTTCTAACC 1822 Query 90 GGACGAC--GTATAACC-GTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT 146 ||| ||||| || | | | |||||| ||| | ||| ||||||||||||||||| Sbjct 1823 T--CGATCGGTATATCCCGGTCA-GGGACAATGTATGGTGGGTAGTTTGACTGGGGCGGT 1879 Query 147 CGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGC 206 | ||||||||||||||||||||| | | ||| || ||||||| || ||||| | || Sbjct 1880 CTCCTCCCAAAGAGTAACGGAGGAGTGCGAAGGTAACCTCAGCGCGGTCGGAAATC--GC 1937 Query 207 GCA--CAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACG 264 ||| |||||| ||||| |||| || |||||||||| || |||||| |||||| ||| Sbjct 1938 GCAATGAGTGCATAGGCATAAGGTTGCTTGACTGCGAGACAAACAAGTCGAGCAGGTACG 1997 Query 265 AAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAA 324 ||||| || | | |||||||| ||| ||| |||||| |||| |||||| |||||||||| Sbjct 1998 AAAGTAGGACAAAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAA 2057 Query 325 GCTACCCTGGGGATA 339 | ||| | ||||||| Sbjct 2058 GGTACTCCGGGGATA 2072 >seq1822 Length=724184 Score = 145 bits (160), Expect = 1e-32 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 ||||| ||| | ||| |||||||||||||||||||||||| ||| ||||||||||||| Sbjct 156002 GGACATTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 155943 Query 172 CCCAAAGATACCCTC-AGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 | ||| || || |||| || ||||| || | ||| ||| || | ||| || Sbjct 155942 TGCGAAGGTAAGCTAGAGCT-GGTCGGAAATCAGCTTGATAGTACAATGGTATAAGCTTG 155884 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||||| | |||| | ||||| |||||||||||| | || |||||||| | Sbjct 155883 CCTGACTGCGAGGCTGACAAGCCAAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTAAT 155824 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| |||||| || |||||| ||||||||||| ||| | ||||||| Sbjct 155823 TCTGTATGGAAGGGTTATCGCTCAACGGATAAAAGGTACGCCGGGGATA 155775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982200975584