Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq4471 78.8 6e-13 seq1750 73.4 2e-11 >seq4471 Length=24596 Score = 78.8 bits (86), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||||||| || |||| | |||| || ||||||| ||||||||||| |||||||||| Sbjct 17951 TCCGAAATTT-TCACCGAATCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAG 17895 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 17894 GGCAGGGACGTAAT-CAACGCGAGCT 17870 >seq1750 Length=152056 Score = 73.4 bits (80), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 2472 TCCGAA-GACCTCACTAAAATATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 2416 Query 99 GGCAGGGACGTAAT 112 ||||||||| |||| Sbjct 2415 GGCAGGGACTTAAT 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300742869620