Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq1822 176 9e-42 seq18426 170 4e-40 seq12515 170 4e-40 >seq1822 Length=724184 Score = 176 bits (194), Expect = 9e-42 Identities = 244/339 (72%), Gaps = 22/339 (6%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||||||||| Sbjct 257800 GCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCT 257859 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 || |||| ||||||| ||| |||||| | ||| |||||||| | |||| |||| | | Sbjct 257860 GGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGC 257919 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 |||||| |||||||| ||||||||| |||||| || ||||| ||| ||| Sbjct 257920 CTTGGTAGGCTATTACTCCACCAACTAGCTAATCTAATATAGGCTCATCTAATAGCAATA 257979 Query 187 AATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCC 246 ||| || || | | | | ||| ||||||||| | ||||| Sbjct 257980 AATTTT----------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCCATTTCC 258022 Query 247 AAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACTAA 306 || ||||||| || ||| || || || | | ||||||||||||| |||||||| Sbjct 258023 AACAATTATTCCGTACTACTAGGTAGATTCCT-ATATATTACTCACCCGTCTGCCACTAA 258081 Query 307 GCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 | |||| || ||||||| | ||| ||| ||||||||| Sbjct 258082 GTTATACCAT--AGCAAGC-TACAATATAACTCCGTTCG 258117 >seq18426 Length=1291 Score = 170 bits (188), Expect = 4e-40 Identities = 130/154 (84%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||||||| ||| || ||||||||||||||||||||||||||| Sbjct 1 GCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 60 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | || |||||||| || |||| |||||| | Sbjct 61 GGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAACTACAGATCGTTGC 120 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 |||||| ||| ||| | ||||||||| |||||| Sbjct 121 CTTGGTAGGCCTTTACCCCACCAACTAGCTAATC 154 >seq12515 Length=3908 Score = 170 bits (188), Expect = 4e-40 Identities = 117/132 (89%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 29 TGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATG 88 ||| ||| || |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3103 TGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 3162 Query 89 TGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACC 148 |||| | || |||||||| || ||||| |||||| ||||||||||||| ||| | |||| Sbjct 3163 TGGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTGGGCTTTTACCCCACC 3222 Query 149 AACTACCTAATC 160 |||||||||||| Sbjct 3223 AACTACCTAATC 3234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998197734144