Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq4471 104 3e-20 seq1750 73.4 5e-11 >seq4471 Length=24596 Score = 104 bits (114), Expect = 3e-20 Identities = 86/103 (83%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG- 65 || ||||||||||||||| || | ||| ||| ||||||||||||||||||||||| Sbjct 17118 TATAAACCAACAAAATAG--ACCAAAGTCTTATCTTATTATTCCATGCTAATGTATTCAA 17061 Query 66 -GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| |||||||||||||||||||||| ||| |||| ||||| Sbjct 17060 CGGCATAAGCCTGCTTTGAACACTCTAGTTTACTCACAGTAAA 17018 >seq1750 Length=152056 Score = 73.4 bits (80), Expect = 5e-11 Identities = 80/105 (76%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGG-- 67 ||||||||||||||| || | ||||||||| |||||||||||| | ||||||||| Sbjct 1620 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCAAGAGTATTCGGGCA 1562 Query 68 --CGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | | |||||| || | ||| |||||| |||| ||||| || Sbjct 1561 GACAAAGGCCTGCGTTAAGCACGTTAATTTGTTCAAAGTAAACGT 1517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595083186606