Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1822 179 6e-43 >seq1822 Length=724184 Score = 179 bits (198), Expect = 6e-43 Identities = 209/282 (74%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||| ||||||| |||||||||| | |||| | |||||||||||||||||| Sbjct 257445 CCCACGCCTTCGCGCTTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 257504 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||| |||| |||| ||| ||||| |||||||| | ||||| | Sbjct 257505 TCCTCCTAATATTTACGAATTTTACCTCTACATCAGGAATTCCTCTACCCTCTTTCAATC 257564 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || ||| || ||||| ||| ||| |||| |||| | |||||| | | ||| Sbjct 257565 TCTAGATTAATAGTTTTAAAAGCAATTCCAAGGTTAAGCCTCGGGATTTCACTTTTAACT 257624 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||| |||||||||| |||||||| |||| |||||||| ||| || || Sbjct 257625 TATTAATCAGCCTACGCGCCCTTTACGCCCAATAATTCCGAATAACGCTAGCCCTCTCCG 257684 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| |||||||| | ||| ||| Sbjct 257685 TATTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 257726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828637340489