Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq14106 140 2e-31 seq1822 113 3e-23 >seq14106 Length=4562 Score = 140 bits (154), Expect = 2e-31 Identities = 116/139 (83%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | ||||||||||||| || ||| Sbjct 2061 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTTTGTCCTA 2002 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT-A 119 |||||| | |||||| | ||||| ||||||| ||||||| ||| |||| |||||| | Sbjct 2001 CTTTCGTACCTGCTCGACTTGTTTGTCTCGCAGTCAAGCAACCTTATGCCTATGCACTCA 1942 Query 120 TCACTACGATTTCCGACCG 138 | | ||||||||||||| Sbjct 1941 TTGCG-CGATTTCCGACCG 1924 >seq1822 Length=724184 Score = 113 bits (124), Expect = 3e-23 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||| ||||||||| || | ||||||||||||||||| Sbjct 155786 TACCTTTTATCCGTTGAGCGATAACCCTTCCATACAGAATTACCGGATCACTATGACCGA 155845 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| |||| |||||| ||| ||| ||| | |||||| ||||| Sbjct 155846 CTTTCGTCTCTGCTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATACCATTGTACTAT 155905 Query 121 CACTACGATTTCCGACC 137 || ||||||||||| Sbjct 155906 CAAGCTGATTTCCGACC 155922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351933145300