Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4471 147 2e-33 seq1750 118 1e-24 >seq4471 Length=24596 Score = 147 bits (162), Expect = 2e-33 Identities = 143/181 (79%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC--TCGAATACATTACCATG 70 |||||| ||| ||| ||||| ||||||||||||| | ||| | |||||||||| |||| Sbjct 17018 TTTACTGTGAGTAAACTAGAGTGTTCAAAGCAGGCTTATGCCGTTGAATACATTAGCATG 17077 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||| ||| ||| | | |||||||||| ||||| || | |||||||| Sbjct 17078 GAATAATAAGATAAGACTTTGG--TCTATTTTGTTGGTTTATATTCCAAG--GTAATGAT 17133 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||| ||| ||| |||||| | |||||| ||||||| ||||||||||||||||||||| Sbjct 17134 TAATAGGGACAGTTGGGGGTATTCGTATTCCATTGTCAGAGGTGAAATTCTTGGATTTAT 17193 Query 191 T 191 | Sbjct 17194 T 17194 >seq1750 Length=152056 Score = 118 bits (130), Expect = 1e-24 Identities = 138/182 (76%), Gaps = 7/182 (4%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG----CTCGAATACATTA 65 || ||||||||||| |||||| | | | || ||||||||||| | ||||||| | Sbjct 1517 ACGTTTACTTTGAACAAATTAACGTGCTTAACGCAGGCCTTTGTCTGCCCGAATACTCTT 1576 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-T 124 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | | | Sbjct 1577 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAAGTCGAGGT 1634 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| ||| |||| | |||||| || ||||| || | ||||||||||||||| Sbjct 1635 AATGATTAATGGGGATTGCCGGGGGCATCCGTATTGCGACGTTAGAGGTGAAATTCTTGG 1694 Query 185 AT 186 || Sbjct 1695 AT 1696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511899515360