Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq14106 156 4e-36 seq1822 114 1e-23 >seq14106 Length=4562 Score = 156 bits (172), Expect = 4e-36 Identities = 128/156 (82%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| |||||||||||||||||| || ||| |||||| ||||| Sbjct 2049 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTTTGTCCTACTTTCGTACCTG 1990 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| || |||||||||||||| | |||||||| |||||| | | |||| || Sbjct 1989 CTCGACTTGTTTGTCTCGCAGTCAAGCAACCTTATGCCTATGCACTCATTGCGCGATTTC 1930 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | | || | ||||||| ||||||||||| Sbjct 1929 CGACCGCGCTGAGGTTACCTTCGCACTCCTCCGTTA 1894 >seq1822 Length=724184 Score = 114 bits (126), Expect = 1e-23 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| ||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct 155798 GTTGAGCGATAACCCTTCCATACAGAATTACCGGATCACTATGACCGACTTTCGTCTCTG 155857 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 || | |||| |||||||||| || ||||||| |||||| |||| | ||| || Sbjct 155858 CTTGGCTTGTCAGCCTCGCAGTCAGGCAAGCTTATACCATTGTACTATCAAGCTGATTTC 155917 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||| ||||||| | ||||||||| Sbjct 155918 CGACCAGCTCTAGCTTACCTTCGCACGCCTCCGTTA 155953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473507051708