Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq14106 300 2e-79 seq1822 279 8e-73 >seq14106 Length=4562 Score = 300 bits (332), Expect = 2e-79 Identities = 231/274 (84%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| |||||||||| |||||| ||||||| ||| | |||||| ||| | Sbjct 2396 GAGGTGGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCGTCCGTATTTAGCTACCCGG 2337 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||| ||||| || |||||||| | || || |||||||||||||||| Sbjct 2336 CGATGCCACTGGCGTGACAACCGGAACACCAGAGATACGTTCAACCCGGTCCTCTCGTAC 2277 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 ||||| || |||||||||||| || ||||||||| | |||||||||||||||||||| | Sbjct 2276 TAAGGTCAACTCCTCTCAAATATCAAACGCCCACGGCAGATAGGGACCGAACTGTCTCAC 2217 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 ||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||||||| Sbjct 2216 GACGTTCTGAACCCAGCTCGCGTACCGCTTTAATTGGCGAACAGCCAAACCCTTGGGACC 2157 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || |||||||||||| Sbjct 2156 TGCTACAGCCCCAGGATGCGATGAGCCGACATCG 2123 >seq1822 Length=724184 Score = 279 bits (308), Expect = 8e-73 Identities = 226/274 (82%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 || ||||| ||| ||||| |||| |||||| ||||||| || | || ||||| ||||| Sbjct 155451 GAAGAGGGTTTCTTGCTTATATGCTTTCAGCAATTATCCCATCTATACATAGCTACCCAG 155510 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 | |||| |||||| ||| ||||| |||||||||| | |||||| |||||||||||||| Sbjct 155511 CGATGCTATTGGCATAACAGCTGGTACACCAGAGGTATATCCATCTCGGTCCTCTCGTAC 155570 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 || | ||| || ||||||||||||| | |||||| | ||||| ||||||||||||| | Sbjct 155571 TAGAGTCAGATCTTCTCAAATTTCCTTCACCCACGGCAGATAGAAACCGAACTGTCTCAC 155630 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 |||||||| |||||| ||| ||| | ||||||| ||||||||||| ||||||||||||| Sbjct 155631 GACGTTCTAAACCCAACTCACGTATCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 155690 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | || ||||||||||||| || ||| |||||||| Sbjct 155691 TTCTCCAGCCCCAGGATGTGATGAGTCGACATCG 155724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780646760924