Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1822 316 5e-84 >seq1822 Length=724184 Score = 316 bits (350), Expect = 5e-84 Identities = 271/333 (81%), Gaps = 4/333 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 257726 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 257667 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||| ||||||||||||| ||||||| | || ||||| | | |||||| | Sbjct 257666 TTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGATTAATAAGTTAAAAGTGAAATCCC 257607 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 |||| |||| || | ||||||| ||||| |||||| || | ||||| || Sbjct 257606 GAGGCTTAACCTTGGAATTGCTTTTAAAACTATTAATCTAGAGATTGAAAGAGGGT--AG 257549 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 ||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||| Sbjct 257548 AGGAATTCCTGATGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 257489 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || || |||| | ||||| |||| || |||| ||||||||||||||||||||||| Sbjct 257488 CGTCTATCTGGTTCAAATCTGACGCTGAAGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 257429 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||||||||||||||||| ||||||||||||| Sbjct 257428 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 257396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202956243712