Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq17938 536 4e-150 seq14106 327 4e-87 seq1822 255 2e-65 seq18566 91.5 5e-16 >seq17938 Length=2741 Score = 536 bits (594), Expect = 4e-150 Identities = 424/500 (85%), Gaps = 15/500 (3%) Strand=Plus/Minus Query 1 TCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct 1330 TCGAGTCCGAATAGGGCGTCTAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCA 1271 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||| Sbjct 1270 TGGCCAGGATGAAGGTGCGGTAACACGCACTGGAGGTCCGAACCGACTAATGTTGCAAAA 1211 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1210 TTAGCGGATGAGCTGTGGATAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 1151 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | Sbjct 1150 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATTACCTGCGGGGGTAGAGCACTGTTTAG 1091 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||||||||||||| ||||||||||||||| |||||||||||||| | || || ||| Sbjct 1090 GCTAGGGGGTCATGGCGACTTACCAAACCTATGCAAACTCCGAATACCGATGAG---TAC 1034 Query 300 CGC--GGGAGTGAGGGCA-TGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGAC 356 || ||||| || ||| ||||||||| ||||| | | ||||| || || || ||| Sbjct 1033 AGCTTGGGAGACAGTGCACCGGGTGCTAACGTCCGGACACAAGAGGGAAACAACCCAGAC 974 Query 357 TATCAGCTAAGGCCCCGAAA--TGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414 ||||||||| ||| ||| || ||||||| | |||||||| || ||||| Sbjct 973 CGCCAGCTAAGGTCCCTAAAATTG---GCTAAGTGGGA--AACGAAGTGGGAAGGCTAAA 919 Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474 |||| ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| Sbjct 918 ACAGTCAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTG 860 Query 475 GTCGAGGAGTCGGGCGTGGA 494 ||||| ||| ||| ||| Sbjct 859 ATCGAGTCGTCCTGCGCGGA 840 >seq14106 Length=4562 Score = 327 bits (362), Expect = 4e-87 Identities = 415/562 (74%), Gaps = 9/562 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||||| ||| || || ||||||||||||||| |||||| |||| Sbjct 291 CGAGTCTTAATAGGGCGACCAGTTGCAGGCTGTAGACCCGAAACCCGTCGATCTATCCAT 350 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | ||||| ||||| || |||||||| | |||||| |||||| ||| |||||||||| Sbjct 351 GTCCAGGGTGAAGTTGTGGTAACACACAATGGAGGCCCGAACTCACGCCTGTTGAAAAAG 410 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 | || |||||| ||||| |||| |||||||||||| ||| || ||||||||||||| Sbjct 411 TCGGAGATGAGGTGTGGATAGGAGTGAAAGGCTAATCAAGGCGGGTGATAGCTGGTTCTC 470 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| ||||| |||||| ||||| || | || |||||||||||||||||| || Sbjct 471 CTCGAAAGCTATTGAGGTAGCGCCTCGCGTCTAACTCAGGGGGGTAGAGCACTGTTACGG 530 Query 241 CTA-GGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTAC 299 ||| ||||| ||| ||||||||||| ||||||||||||||| | | |||| | Sbjct 531 CTAGGGGGGACATAAGTCCTTACCAAACCGTTGCAAACTCCGAATACCCTGAAGTTCAAT 590 Query 300 CGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTAT 359 |||||||| | |||| ||||| | | | ||||| | || || ||| Sbjct 591 CGCGGGAGACACACGGTGGGAGCTAAATTTCATCGTGAAGAGGGAGACAACCCAGACCGC 650 Query 360 CAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGC 419 ||||||||| ||| |||| | ||||||| | ||||| || || | ||||||| Sbjct 651 CAGCTAAGGTCCCTAAATTATCGCTAAGTGGTA--AACGATGTGGGAAGTCATAGACAGC 708 Query 420 TAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGA 479 ||||||||||||| |||||||||| ||||||||||| |||||| |||||||| ||||| Sbjct 709 CAGGATGTTGGCTTAGAAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTGGTCGA 767 Query 480 GGAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCAT- 537 | | | ||| ||| || | |||| |||| | ||||||||| | ||| ||| Sbjct 768 GTCGGCCTGCGCGGAAGATGTAACGGG-GCTAAGCGATATACCGAAGCTGCGGGTGCATA 826 Query 538 -TTATATGATCGGTAGGGGAGC 558 ||||| |||||| ||||| Sbjct 827 GCAATATGCGCGGTAGAGGAGC 848 >seq1822 Length=724184 Score = 255 bits (282), Expect = 2e-65 Identities = 334/451 (74%), Gaps = 15/451 (3%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||||||||||||||| |||| |||| ||||||| ||||| || ||| Sbjct 157444 TAGACCCGAAACCAAGTGATCTAGTCATGACCAGATTGAAGGTATGGTAAAACATACTGA 157385 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| |||||| |||||||| || |||| ||||||| |||| |||||||||||||| Sbjct 157384 AGGATCGAACCAGTTAATGTTGCAACATTATTGGATGAGTTGTGATTAGGGGTGAAAGGC 157325 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT--CAAGT 210 || |||||||||||||||||||||||| ||||| |||||||||||| || | | || Sbjct 157324 CAATCAAACTTGGAAATAGCTGGTTCTCCGCGAAATCTATTTAGGTAGAGCGTTGTATGT 157265 Query 211 ATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGG--TCATTGCGACTTACCAAACC 268 || | ||||||||||||||| | |||||||| |||| | ||||||||| | Sbjct 157264 AT-GTTGTTGGGGGTAGAGCACTGGATAGACTAGGGGGATTCAT--CATCTTACCAAATC 157208 Query 269 ATTGCAAACTCCGAATGCGCATCAGTT--TTACCGCGGGAGTGAGGGCATGGGTGCTAAG 326 |||||||||||| | || || || ||| | | || | | ||||||||| Sbjct 157207 TAACCAAACTCCGAATAC-CAACAATTAATTA-TACAGCAGACACACTACGGGTGCTAA- 157151 Query 327 GTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAA 386 ||||||| | ||| || | || || | | |||||| ||| |||| |||||||| Sbjct 157150 GTCCGTGGTGAAAAGGGAAACAGCCCAGATCACTATCTAAGGTCCCAAAATTACAGCTAA 157091 Query 387 GTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 || || ||||| | | | |||||||||| ||||||||||||||||||| | Sbjct 157090 GT--GGGGAAGGAAGTAGAAAAACCATTACAGCTAGGAGGTTGGCTTGGAAGCAGCCA-T 157034 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 | |||||||| ||||||||||||||| ||| Sbjct 157033 CCTTTAAAGAAAGCGTAACAGCTCACTTGTC 157003 >seq18566 Length=2075 Score = 91.5 bits (100), Expect = 5e-16 Identities = 121/167 (72%), Gaps = 1/167 (1%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCT-GGA 93 ||| |||||||| ||||||| |||| ||||||||| || ||| | || | ||| Sbjct 848 GACACGAAACCACTTGATCTAATCATGAACAGGATGAATTTGGCTTAAAAAACCATTGGA 907 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 ||||||||| | ||||| |||| | || || |||| ||||||||||||||| Sbjct 908 GGTCCGAACTCGTATCTGTTGCAAAAGATTGAGACGATTTGTGATTAGGGGTGAAAGGCT 967 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200 | |||| |||| |||||| ||| | ||||| ||||||| |||| Sbjct 968 TATCAAAAGTGGAGATAGCTTGTTATTCGCGAAATCTATTTAAGTAG 1014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689257703936