Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq1822 168 1e-39 seq18426 136 8e-30 seq12515 129 1e-27 >seq1822 Length=724184 Score = 168 bits (186), Expect = 1e-39 Identities = 158/200 (79%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 80 TAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACT 139 ||||||| ||||||| || || ||||| || ||| || || ||||||| |||| || Sbjct 257754 TAAAAGAGCTTTACAACCCAAAGG-CCTTCTTCACTCATGCGACATGGCTGGATCAGGCT 257812 Query 140 CTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCA 199 ||| |||||| |||||||||| |||||||||||||||||||||| |||||||| ||||| Sbjct 257813 TTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCA 257872 Query 200 GTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGT 259 |||||| ||||| || | |||||||||| | |||| ||| | | || ||| ||| | Sbjct 257873 GTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGCCTTGGTAGGCTAT 257932 Query 260 TACCCCGCCTACTACCTAAT 279 ||| || || |||| ||||| Sbjct 257933 TACTCCACCAACTAGCTAAT 257952 >seq18426 Length=1291 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 127 GCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTT 186 ||||| |||| || || |||||| |||| ||||| |||||||||||||||||||||| | Sbjct 1 GCTGGATCAGGCTTGCGCCCATTGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCT 60 Query 187 GGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGG 246 || |||||||||||| ||| ||||| | | |||||||||| | ||| ||||| | Sbjct 61 GGGCCGTGTCTCAGTCCCAGTGTGGCTGGTCGTCCTCTCAGACCAACTACAGATCGTTGC 120 Query 247 CTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 || ||| |||| ||||||| || |||| ||||| Sbjct 121 CTTGGTAGGCCTTTACCCCACCAACTAGCTAAT 153 >seq12515 Length=3908 Score = 129 bits (142), Expect = 1e-27 Identities = 107/131 (82%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||| ||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 3103 TGTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 3162 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 ||| | | |||||||||| | ||| ||||| |||| ||||||| ||||||| || Sbjct 3163 TGGCTGGTCGTCCTCTCAGACCAGCTACAGATCGTTGGCTTGGTGGGCTTTTACCCCACC 3222 Query 269 TACTACCTAAT 279 |||||||||| Sbjct 3223 AACTACCTAAT 3233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068583471808