Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gerris_20buenoi_20[genbank_20GCA_5F001010745.1_202015-05-21] 20,259 sequences; 1,000,161,732 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq4471 118 2e-24 seq265 84.2 4e-14 >seq4471 Length=24596 Score = 118 bits (130), Expect = 2e-24 Identities = 107/132 (81%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| ||||||||| || || || ||| | |||| Sbjct 23037 GTACGAGAGGAACCGTTGG-TTCAGAC-AATTGGTTTATGGGGTTGGTTGAATAACCAGT 23094 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||| | Sbjct 23095 GCCCCGAAGCTACCATCTGCAGGATAATGACTGAACGCCTCTAAGTCAGAATCCATACTG 23154 Query 121 GAACGGGGTGAT 132 ||| | | |||| Sbjct 23155 GAAAGCGATGAT 23166 >seq265 Length=641558 Score = 84.2 bits (92), Expect = 4e-14 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | |||||| || | | | || | | | || Sbjct 448115 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTTCACGCAGTCGGCCGAGCGGCCGGT 448058 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||||||||| || | ||||||||| ||||||||||||||| ||||||| Sbjct 448057 GCTGCGAAGCTACCGTCCGTTGGATTATGCCTGAACGCCTCTAAGGCAGAATC 448005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819039224576