Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq135 174 3e-41 seq54 138 2e-30 >seq135 Length=742707 Score = 174 bits (192), Expect = 3e-41 Identities = 238/329 (72%), Gaps = 14/329 (4%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | | ||||||| || | ||| | |||| Sbjct 574272 AGGGGAGTGAAATAGAACCTGAAACCGTGTACGTACAAGCAGTGGAAGCA---TCCTTCG 574216 Query 71 G----TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTT 126 | |||| |||| ||||||| |||||| | | ||| ||| | | ||| ||||| Sbjct 574215 GGGTGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTTTGTAGCAAGGTT 574157 Query 127 AAGGGCT-TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGT 185 || | | ||| ||||| || |||| |||| |||||| ||||| ||||| Sbjct 574156 AACTGTAATAAGGG-----AGCCGTAGGGAAACCGAGTCTTAACTGGGCGTTAAGTTGCA 574102 Query 186 GGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGT 245 | ||||| ||||||| |||||||| ||| | ||||||||||| |||||| | Sbjct 574101 AGATATAGACCCGAAACCCGGTGATCTAGCCATGGGCAGGTTGAAGGTTGGGTAACACTA 574042 Query 246 GATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGA 305 ||||||||||||||| || |||||||| || ||||||||| | || | ||||||| Sbjct 574041 ACTGGAGGACCGAACCGACTAATGTTGAAAAATTAGCGGATGACTTGTGGCTGGGGGTGA 573982 Query 306 AAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||| |||| |||||| || Sbjct 573981 AAGGCCAATCAAACCGGGAGATAGCTGGT 573953 >seq54 Length=1154455 Score = 138 bits (152), Expect = 2e-30 Identities = 191/264 (72%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| |||||||||||||| | | ||||||| || | ||| || ||||| Sbjct 89437 GTGACAGCGTACCTTTTGCATAATGGGTCAGCGAGTTAATC-TATGAAGCAAGCTTAAGC 89495 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 || ||| ||| || || |||||| || || || |||||| |||| | Sbjct 89496 CGTT-AGGTG---TAGGCGTAGCGAAAGCAAGTCTGAATAGGGCGTTTAGTTTTATGGAT 89551 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| |||||||| || || ||| |||||| | ||||| | ||| Sbjct 89552 TAGACCCGAAACCAAGTGATCTAGTCATGACCAGATTGAAGGTGTGGTAAAACACACTGG 89611 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||| |||||| || || |||| || || | |||||| | | | |||||||||||||| Sbjct 89612 AGGATCGAACCAGTTAATGTTGCAACATTATTGGATGAGTTGTGATTAGGGGTGAAAGGC 89671 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 |||||||||| |||||||||| || Sbjct 89672 CAATCAAACTTGGAAATAGCTGGT 89695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972778549760