Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq54 96.9 3e-18
seq135 86.0 6e-15
>seq54
Length=1154455
Score = 96.9 bits (106), Expect = 3e-18
Identities = 133/179 (74%), Gaps = 14/179 (8%)
Strand=Plus/Plus
Query 10 TGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGA 69
||||||||| ||| | ||||||| |||||||||| | ||||||| ||||| |||||
Sbjct 88917 TGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATAAGCTGTGGGGA 88976
Query 70 -TTGGCACATACGAATT--GATCCGTAGATATCCGAATGGGGCAACCC-GATATATTGG- 124
||| || || |||| |||||| |||| ||||||||||| ||||| | || || |
Sbjct 88977 ATTGTCA---ACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAGCTAGCTTAGC 89033
Query 125 -AGATATATCATAACGCTAGG--CGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
|| ||| |||| ||| | || | || ||| ||| ||||||||| |||||||||
Sbjct 89034 TAGTTATTACATA---CTAAGTATGTAAAGCAAACTTGGTGAACTGAAATATCTAAGTA 89089
>seq135
Length=742707
Score = 86.0 bits (94), Expect = 6e-15
Identities = 92/121 (76%), Gaps = 8/121 (7%)
Strand=Plus/Minus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
|| ||||||||||||| || ||||||| |||||||||| ||| ||||||||||| ||
Sbjct 574743 ACAGTGGATGCCTAGGTAGTCAGAGGCGATGAAGGACGTGCTAATCTGCGAAAAGCGTCG 574684
Query 66 GGGATTGGCACATACGAA-----TTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120
| | || ||||||| | | ||| ||||||||||||||| ||||||||| |
Sbjct 574683 G---CTAGCTGATACGAAGCATTATTAACCGGCGATATCCGAATGGGGAAACCCGATACA 574627
Query 121 T 121
|
Sbjct 574626 T 574626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476789815105
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |