Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq135 154 2e-35 seq54 145 1e-32 >seq135 Length=742707 Score = 154 bits (170), Expect = 2e-35 Identities = 189/255 (74%), Gaps = 10/255 (4%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| |||||||| || |||| | || || |||| Sbjct 572906 TTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC-GTGTTTGCACA 572964 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||| |||||||| || || || | |||||||| | |||||| Sbjct 572965 GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTGCGACTGGCTTCAGCTCGG 573024 Query 122 CACGT-----CGTTCACCAGCAGTGGCACC---CCTTCTCCCGAAGTTACGGGGCCATTT 173 || | | |||| || || || | ||||||||||||||||||| | |||| Sbjct 573025 GGCGCAAGGCCCTCCACCTACA-TGCCAGCGTGCCTTCTCCCGAAGTTACGGCACTATTT 573083 Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233 |||| | |||||| ||| ||||| | | | ||||||||||| ||||||| || ||||| Sbjct 573084 TGCCTAGTTCCTTCACCTGAGTTCTCTCAAGCGCCTTAGTATGCTCTACCAAACTACCTG 573143 Query 234 TGTCGGTTTACGGTA 248 ||||||||| |||| Sbjct 573144 TGTCGGTTTTAGGTA 573158 >seq54 Length=1154455 Score = 145 bits (160), Expect = 1e-32 Identities = 183/247 (74%), Gaps = 12/247 (5%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| ||||||||||||||||| || ||||| || ||||| ||| || ||| Sbjct 90634 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTA-CGTGTTTGCAGA 90576 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121 | ||||||||||||||||||||||||| | | ||||| | || ||||| |||| Sbjct 90575 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 90523 Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || | | |||| || ||||||| |||||||||| || | |||||||| | Sbjct 90522 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 90466 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| | || ||| | ||| ||||||||| |||||| ||||| ||||||||| Sbjct 90465 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCCACCAGTGTCGGTT 90407 Query 242 TACGGTA 248 | ||||| Sbjct 90406 TGCGGTA 90400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694385166965