Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq135 154 2e-35
seq54 145 1e-32
>seq135
Length=742707
Score = 154 bits (170), Expect = 2e-35
Identities = 189/255 (74%), Gaps = 10/255 (4%)
Strand=Plus/Plus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| |||||| |||||||||||||||| |||||||| || |||| | || || ||||
Sbjct 572906 TTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTC-GTGTTTGCACA 572964
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| |||||||| || || || | |||||||| | ||||||
Sbjct 572965 GTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTGCGACTGGCTTCAGCTCGG 573024
Query 122 CACGT-----CGTTCACCAGCAGTGGCACC---CCTTCTCCCGAAGTTACGGGGCCATTT 173
|| | | |||| || || || | ||||||||||||||||||| | ||||
Sbjct 573025 GGCGCAAGGCCCTCCACCTACA-TGCCAGCGTGCCTTCTCCCGAAGTTACGGCACTATTT 573083
Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233
|||| | |||||| ||| ||||| | | | ||||||||||| ||||||| || |||||
Sbjct 573084 TGCCTAGTTCCTTCACCTGAGTTCTCTCAAGCGCCTTAGTATGCTCTACCAAACTACCTG 573143
Query 234 TGTCGGTTTACGGTA 248
||||||||| ||||
Sbjct 573144 TGTCGGTTTTAGGTA 573158
>seq54
Length=1154455
Score = 145 bits (160), Expect = 1e-32
Identities = 183/247 (74%), Gaps = 12/247 (5%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| ||||||||||||||||| || ||||| || ||||| ||| || |||
Sbjct 90634 TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTA-CGTGTTTGCAGA 90576
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||||||||||||||||| | | ||||| | || ||||| ||||
Sbjct 90575 GTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTG------CCACCTACTCA- 90523
Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181
|| | | |||| || ||||||| |||||||||| || | |||||||| |
Sbjct 90522 -TAGTTGCCTAAAAGCA--GGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGT 90466
Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241
||||| | || ||| | ||| ||||||||| |||||| ||||| |||||||||
Sbjct 90465 TCCTTCAACATCATTCTTTC-AACACCTTAGTATACTCTACTCATCCACCAGTGTCGGTT 90407
Query 242 TACGGTA 248
| |||||
Sbjct 90406 TGCGGTA 90400
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694385166965
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |