Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq135 185 8e-45 seq54 129 6e-28 >seq135 Length=742707 Score = 185 bits (204), Expect = 8e-45 Identities = 125/140 (89%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 19 GGAGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTA 78 |||||| ||||| || |||| | ||| |||| ||||||||| ||||| |||||||| Sbjct 573039 GGAGGGCCTTGCGCCCCGAGCTGAAGCCAGTCGCAGATACCAGCTGGCTGCAACTGTTTA 572980 Query 79 TTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGG 138 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 572979 TTAAAAACACAGCACTGTGCAAACACGAAAGTGGACGTATACGGTGTGACGCCTGCCCGG 572920 Query 139 TGCCGGAAGGTTAATTGATG 158 |||||||||||||||||||| Sbjct 572919 TGCCGGAAGGTTAATTGATG 572900 >seq54 Length=1154455 Score = 129 bits (142), Expect = 6e-28 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||| ||| Sbjct 90550 GCGACTGTTTACTAAAAACACAGGACTCTGCAAACACGTAAGTGGAAGTATAGGGTCTGA 90609 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAAT 153 |||||||||||||| ||||||||||| Sbjct 90610 CGCCTGCCCGGTGCTGGAAGGTTAAT 90635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476789815105