Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq135 547 2e-153 seq54 300 4e-79 >seq135 Length=742707 Score = 547 bits (606), Expect = 2e-153 Identities = 382/431 (89%), Gaps = 5/431 (1%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct 572710 CGCGGGTACACCGCATCTTCACGGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 572769 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 572770 CTGACCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 572829 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 572830 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTA 572889 Query 181 --GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 572890 CGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCAC 572949 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 ||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct 572950 TTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTGCGA 573009 Query 299 CCGGCATGAGCTTACGGAGCAA-GTCCTTCACCCTCA--CCGGCGCACCTTCTCCCGAAG 355 | ||| | |||| || |||| | ||| |||| || || ||| ||||||||||||| Sbjct 573010 CTGGCTTCAGCTCGGGGCGCAAGGCCCTCCACCTACATGCCAGCGTGCCTTCTCCCGAAG 573069 Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||| | ||||||||||||||||| || ||||||||||||||||||| |||| ||| Sbjct 573070 TTACGGCACTATTTTGCCTAGTTCCTTCACCTGAGTTCTCTCAAGCGCCTTAGTATGCTC 573129 Query 416 TACCCAACCAC 426 |||| ||| || Sbjct 573130 TACCAAACTAC 573140 >seq54 Length=1154455 Score = 300 bits (332), Expect = 4e-79 Identities = 234/279 (84%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||| | |||||| ||| | || ||||||||| |||| | ||||||||| Sbjct 90819 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTGATGTTGGAGACAGT 90760 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 90759 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 90700 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||| | ||||||||||||||||||| |||||||| || ||||||| || Sbjct 90699 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATTTAGAGCTT-GC---- 90645 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||| Sbjct 90644 ----ACCCCTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 90589 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279 |||||||||||||| ||||||||||| ||||||||||| Sbjct 90588 ACGTGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 90550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260772199360