Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq135 547 2e-153
seq54 300 4e-79
>seq135
Length=742707
Score = 547 bits (606), Expect = 2e-153
Identities = 382/431 (89%), Gaps = 5/431 (1%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 572710 CGCGGGTACACCGCATCTTCACGGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 572769
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572770 CTGACCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 572829
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 572830 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCTTA 572889
Query 181 --GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 572890 CGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCAC 572949
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
||||||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||
Sbjct 572950 TTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTGCGA 573009
Query 299 CCGGCATGAGCTTACGGAGCAA-GTCCTTCACCCTCA--CCGGCGCACCTTCTCCCGAAG 355
| ||| | |||| || |||| | ||| |||| || || ||| |||||||||||||
Sbjct 573010 CTGGCTTCAGCTCGGGGCGCAAGGCCCTCCACCTACATGCCAGCGTGCCTTCTCCCGAAG 573069
Query 356 TTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||||| | ||||||||||||||||| || ||||||||||||||||||| |||| |||
Sbjct 573070 TTACGGCACTATTTTGCCTAGTTCCTTCACCTGAGTTCTCTCAAGCGCCTTAGTATGCTC 573129
Query 416 TACCCAACCAC 426
|||| ||| ||
Sbjct 573130 TACCAAACTAC 573140
>seq54
Length=1154455
Score = 300 bits (332), Expect = 4e-79
Identities = 234/279 (84%), Gaps = 9/279 (3%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||| | |||||| ||| | || ||||||||| |||| | |||||||||
Sbjct 90819 CGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTGATGTTGGAGACAGT 90760
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 90759 GGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 90700
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
|||||||||| | ||||||||||||||||||| |||||||| || ||||||| ||
Sbjct 90699 TTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATTTAGAGCTT-GC---- 90645
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||| | ||||||||||| ||||||||||||||||| ||||||||| |||||||
Sbjct 90644 ----ACCCCTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTT 90589
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 279
|||||||||||||| ||||||||||| |||||||||||
Sbjct 90588 ACGTGTTTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGC 90550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260772199360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |