Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq54 280 3e-73
seq135 221 3e-55
>seq54
Length=1154455
Score = 280 bits (310), Expect = 3e-73
Identities = 283/367 (77%), Gaps = 21/367 (6%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||||| |||||| ||| |||| | ||||||| | || || | ||||||||| ||
Sbjct 90813 TACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGTGATGTTGGAGACAGTGGAGAA 90754
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90753 ATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 90694
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
|||| | |||||||||||||||||||||||||| | || | || |||| ||
Sbjct 90693 CCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATTTAGAGC-----TTGC----AC 90643
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
||| ||||||||||||||||||||||||||||| ||||||| || ||| || |
Sbjct 90642 CCCTCCTATTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACTTCCACTTACGTGT 90583
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCT-GTCA 299
| ||||| ||||||||||| ||||||||||||| |||||| | ||| ||| |||
Sbjct 90582 TTGCAGAGTCCTGTGTTTTTAGTAAACAGTCGCTACTCCCTATTTTGTGCCACCTACTCA 90523
Query 300 TAG----------ACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCC 349
||| |||| ||||||| || ||||||| || | |||||||||||||
Sbjct 90522 TAGTTGCCTAAAAGCAGGTTACCCTTCTTCCGAAGTTACAGGTATAATTTGCCGAGTTCC 90463
Query 350 TT-AACA 355
|| ||||
Sbjct 90462 TTCAACA 90456
>seq135
Length=742707
Score = 221 bits (244), Expect = 3e-55
Identities = 220/282 (78%), Gaps = 16/282 (6%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58
||| | |||||||||| | || | ||||||||| |||||| || ||||||| || ||
Sbjct 572716 TACACCGCATCTTCACGGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGACC 572775
Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118
| || ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 572776 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 572833
Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178
|||||||||||||||||||||||||||| ||||||| | | ||||| ||
Sbjct 572834 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC-----TCCTT 572888
Query 179 ACAGAT--CCCC-----TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGT 231
|| ||| |||| |||||||||| ||||||||||||||||| | ||||| ||
Sbjct 572889 ACGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCA 572948
Query 232 CTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
||| || || ||| | |||||||||| |||||||| ||
Sbjct 572949 CTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGC 572990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062376574080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |