Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq54 482 7e-134 >seq54 Length=1154455 Score = 482 bits (534), Expect = 7e-134 Identities = 415/506 (82%), Gaps = 17/506 (3%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 28049 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 27990 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTC-TGACCCCT 119 |||||||||||||| |||||||||| |||||||||| |||||||| | | ||| Sbjct 27989 GTGGTTTAATTCGATGCAACGCGAAAAACCTTACCACTCCTTGACATGGAAATTATACCT 27930 Query 120 CT----AGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG---ACAGGTGATGCATGGTT 172 | || ||||| ||| | ||||| | || | ||||||| ||||||| | Sbjct 27929 ATTCGAAGGGATAG-GGT---CGGTTCGGCCG---GATTTCACACAGGTGTTGCATGGCT 27877 Query 173 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGC 232 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 27876 GTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCATCC 27817 Query 233 TTAGTTGCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGA 290 |||||| |||||| ||| | |||| ||| |||| |||||| |||| |||| |||||| Sbjct 27816 TTAGTTACCATCAGGTAATGCTGGGGACTTTAAGGAAACTGCCAGTGATAAACTGGAGGA 27757 Query 291 AGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAA 350 ||||||||| || ||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct 27756 AGGTGGGGATGATGTCAAGTCATCATGGCCCTTATGGAGTGGGCTACACACGTGCTACAA 27697 Query 351 TGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCA 410 ||| ||||| |||| || || ||||||| |||| |||||| |||| ||||| Sbjct 27696 TGGTGGCTACAATGGGCTGCAAAGTCGCGAGGCTAAGCTAATCCCTTAAAAGCCATCTCA 27637 Query 411 GTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 |||||||||||| |||||||||||| | |||||| ||||||||||||||||||| |||| Sbjct 27636 GTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGTTGGAATCGCTAGTAATCGTGGATC 27577 Query 471 AGCATGCTACGGTGAATACGTTCCCG 496 |||| || ||||||||||||||| || Sbjct 27576 AGCACGCCACGGTGAATACGTTCTCG 27551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503966836800