Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12] 2,205 sequences; 370,264,922 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq16 141 1e-31 seq640 140 5e-31 seq7 111 3e-22 seq75 109 9e-22 seq27 95.1 2e-17 seq2 95.1 2e-17 seq452 87.8 3e-15 seq67 86.0 1e-14 seq708 84.2 3e-14 seq278 84.2 3e-14 seq107 84.2 3e-14 seq311 75.2 2e-11 seq297 73.4 6e-11 >seq16 Length=2714463 Score = 141 bits (156), Expect = 1e-31 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 ||||||||||||||||||| | |||||||||||||| |||||||||||||||||||| Sbjct 2349307 CTCGTTCGTTATCGGAATTCATTGGACAAATCACTCCAGTAACTAAGAACGGCCATGCAC 2349366 Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| || ||||||||||||||||||||| Sbjct 2349367 CACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 2349404 >seq640 Length=105761 Score = 140 bits (154), Expect = 5e-31 Identities = 91/100 (91%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||| Sbjct 37620 GTCTCGTTCGTTATCGGAATTAATCAGACAAATCACTGCACGAACTAAGAACGGCCATGC 37561 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||| || |||||| || Sbjct 37560 ACCACCACCCATAGATTCGAGAAAGACCTGCCAATCTCTC 37521 >seq7 Length=3650875 Score = 111 bits (122), Expect = 3e-22 Identities = 84/99 (85%), Gaps = 4/99 (4%) Strand=Plus/Minus Query 163 CGTTCGTTATCGGAATTAACCA----GACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||| || ||||| ||||||| |||||||||||||| |||| |||||||||||| Sbjct 1723374 CGTTCATTGTCGGAGTTAACCAAACAGACAAATCACTCCAAGAACTTGGAACGGCCATGC 1723315 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGT 257 ||||||| ||||||| || |||||||||| ||||||||| Sbjct 1723314 ACCACCATCCATAGACTCGAGAAAGAGCTGTCAATCTGT 1723276 >seq75 Length=981352 Score = 109 bits (120), Expect = 9e-22 Identities = 86/102 (84%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 158 GGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCC-ACCAACTAAGAACGGCCAT 216 ||||||||||||||||| |||||| |||||||||| |||| || || |||||| | ||| Sbjct 482507 GGTCTCGTTCGTTATCGAAATTAATCAGACAAATCGCTCCAACGAATTAAGAAGCGTCAT 482448 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| |||| |||| || ||||||||||| || |||||| || Sbjct 482447 GCACTACCATCCATTGATTCAAGAAAGAGTTACCAATCTCTC 482406 >seq27 Length=1832817 Score = 95.1 bits (104), Expect = 2e-17 Identities = 75/90 (83%), Gaps = 5/90 (6%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||| ||||| ||||||||||||||| ||||| ||||||||||| |||||||| ||||||| Sbjct 1105360 TTAACGGAAGTAACCAGACAAATCATTCCACGAACTAAGAACGACCATGCACTACCACCC 1105301 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | | || ||||||||||| |||||| Sbjct 1105300 -----ACCGAGGAAGAGCTATCAGTCTGTC 1105276 >seq2 Length=5778943 Score = 95.1 bits (104), Expect = 2e-17 Identities = 81/99 (82%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA-AGAACGGCCATGCA 219 || ||||||||| ||||| || ||||||||||||||||| | || | | ||||||||| Sbjct 2944973 CTTGTTCGTTATGGGAATAAATCAGACAAATCACTCCACGAGCTCCATGAGGGCCATGCA 2945032 Query 220 CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| |||| || |||||||| || ||||| || Sbjct 2945033 CCACCACCCGTAGATTCGAGAAAGAGTCATTAATCTCTC 2945071 >seq452 Length=211175 Score = 87.8 bits (96), Expect = 3e-15 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||| | |||||| || |||||| | ||| Sbjct 191027 GTCTCGTTCGTTATCGGAATTAACCAGACAAACCGCTCCACGAAATAAGAATAACTATGG 190968 Query 219 ACCACCACCCATAGAATCAAGAAAGA 244 ||||| ||| ||| || ||||||| Sbjct 190967 GTCACCATCCACAGATTCGAGAAAGA 190942 >seq67 Length=1067480 Score = 86.0 bits (94), Expect = 1e-14 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||||| ||| Sbjct 399692 GTCTCATTCGTTATCGGAATTAACCGGACAAATCACTTCACGAACTAAGAACGGCCGTGC 399633 >seq708 Length=68324 Score = 84.2 bits (92), Expect = 3e-14 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 163 CGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCA 222 ||||| ||||||||| ||||||||||||||| | || ||||| |||||||||| | Sbjct 57888 CGTTCATTATCGGAAATAACCAGACAAATCAATTGACGAACTATGAACGGCCATATGTCG 57829 Query 223 CCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||| || || | || ||||||||||||||| Sbjct 57828 CCAGCCCTAAATTCGGGAAAGAGCTATCAAT 57798 >seq278 Length=415998 Score = 84.2 bits (92), Expect = 3e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 ||| ||||| | ||| | ||||| ||||| ||||||||| |||||||||| || ||||| Sbjct 382934 CAGGCAAATTAGTCCGCGAACTATGAACGATCATGCACCATCACCCATAGATTCGAGAAA 382993 Query 243 GAGCTATCAATCTGTC 258 ||||||||||||| || Sbjct 382994 GAGCTATCAATCTCTC 383009 >seq107 Length=835088 Score = 84.2 bits (92), Expect = 3e-14 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||||||| || || |||| ||||| || |||| |||||||||||||||| ||||| Sbjct 681497 CTATTTAATAGATTTGAGTCTACTTCGTATTCAGAATCAACCAGACAAATCACTTCACCA 681438 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 |||| ||| || ||| |||||||| | |||| || ||||| Sbjct 681437 ACTATGAATGGTCATCCACCACCATTCGTAGATTCGAGAAA 681397 >seq311 Length=318471 Score = 75.2 bits (82), Expect = 2e-11 Identities = 54/61 (89%), Gaps = 1/61 (2%) Strand=Plus/Plus Query 20 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAAC 79 ||||||||| |||| |||||| |||||||| |||||||||||||||||||| ||||| | Sbjct 147965 TGTAGCGCGTGTGCAGCCCAGGGCATCTAAGAGCATCACAGACCTGTTATTG-CTCAATC 148023 Query 80 T 80 | Sbjct 148024 T 148024 >seq297 Length=392488 Score = 73.4 bits (80), Expect = 6e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACG 211 |||||| |||||||| |||||||||| ||||||||||||| ||||||||||| Sbjct 81172 GTCTCGCTCGTTATCCGAATTAACCAAACAAATCACTCCAAGAACTAAGAACG 81224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796782979605