Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq135 167 5e-39
seq54 154 3e-35
>seq135
Length=742707
Score = 167 bits (184), Expect = 5e-39
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
|||| |||| | ||| |||||||||||||||||| ||||| ||||||||||||||| ||
Sbjct 572534 GACAATGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGC 572475
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232
||||| | || | | || |||| | | || | |||||||||||| ||| | |
Sbjct 572474 ACAAAGGTTAGCTAATCACGGTTGGACATCGTGAGTTTAGTGCAAAGGCATAAGCTAGCT 572415
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
| ||||||| | ||| || ||||| |||||| || |||| |||||||| ||| |
Sbjct 572414 TAACTGCGAGAGTGACAATTCAAGCAGATGCGAAAGCAGGTCTTAGTGATCCGGTGGTTC 572355
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| |||||| |||| |||||| ||||||||||| ||| | |||||||
Sbjct 572354 TGCATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGGGGATA 572308
>seq54
Length=1154455
Score = 154 bits (170), Expect = 3e-35
Identities = 173/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
||||| ||| | ||| |||||||||||||||||||||||| ||| |||||||||||||
Sbjct 90994 GGACATTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAAAGTAACGGAGGCG 91053
Query 172 CCCAAAGATACCCT-CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
| ||| || || ||| ||| ||||| || | ||| || |||| ||| ||
Sbjct 91054 TGCGAAGGTAAGCTAGAGC-TGGTCGGAAATCAGCTTGATAGTATAATGGCATAAGCTTG 91112
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
||||||||| | |||| | ||||| |||||||||||| | || |||||||| | |
Sbjct 91113 CCTGACTGCGAGGCTGACAAGCCAAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGAT 91172
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| |||||| || | |||||| ||||||||||| ||| | |||||||
Sbjct 91173 TCTGTATGGAAGGGTCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 91221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 982378338080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |