Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20austeni_20[genbank_20GCA_5F000688735.1_202014-05-12]
2,205 sequences; 370,264,922 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq135 143 3e-32
seq54 127 2e-27
>seq135
Length=742707
Score = 143 bits (158), Expect = 3e-32
Identities = 122/152 (80%), Gaps = 2/152 (1%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| |||||||| | |||||||||| | | | |||||||||||
Sbjct 572691 CGGGGTCTTTCCGTCTTGCCGCGGGTACACCGCATCTTCACGGCGAGTTCAATTTCACTG 572750
Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
|| || ||| || |||||| ||| |||||||||||||||||||||||||
Sbjct 572751 AG-TCTCGGGTGGAGACAGCCTGACCATCATTACGCCATTCGTGCAGGTCGGAACTTACC 572809
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||
Sbjct 572810 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 572841
>seq54
Length=1154455
Score = 127 bits (140), Expect = 2e-27
Identities = 131/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||| |||||| | |||||||| | |||||| ||| | | | ||||||| |||
Sbjct 90838 CGGGGTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTG 90779
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| | | | | ||||||| ||| |||||||||| |||||||||||||||
Sbjct 90778 AAGTGATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCC 90719
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202
||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 90718 GACAAGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTC 90659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547188311295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |